Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00115 ATGTCACAAGGTTACGCTATCGAGCTCTACTTCGATCCTGCGCTAGAAAACCAGGTGTTGAAGGCCTGGAATGCGCTGGCTCGGCGACAAATCAGCACCCATCTCATCGAAATCGAGTCTCGCCCGCACATCACTCTCTTTTCCAGCCCTTTTGCTGATTCCGCCAAACTTGAATCAGTTGTCAAGAGTTTCGCCGCCAAGCAGGAACCCTTGCCTCTATCTTTCTCTACAATCGGGTGCCTACCAAACGACAATAATGTACTCTTTCTTTCACCGACCCCTTCAATCTGGCTGCTTCAGTTCCAATCGCAGCTGTGCGATGCAATGAAGAAAGAAGGTTTCGAGATAGGAGAGGATTATCGCCCAGATTCTTGGATTCCTTATTGCGCGGTAGCTCAGGAAGTGCCGAAAATTAGGATGGCCGAGGCGGTTTGTGTCTTGCGGGACTTGAAATTGCCTGTTTCTGGGTATGCCATGGATATTGGGCTGGTGGAGTTATCTCCCACTCGCGAGCTCTTCTCATTTGCGCTTGGTAATTCAGTAGAAACATGA 552 0.4946 MSQGYAIELYFDPALENQVLKAWNALARRQISTHLIEIESRPHITLFSSPFADSAKLESVVKSFAAKQEPLPLSFSTIGCLPNDNNVLFLSPTPSIWLLQFQSQLCDAMKKEGFEIGEDYRPDSWIPYCAVAQEVPKIRMAEAVCVLRDLKLPVSGYAMDIGLVELSPTRELFSFALGNSVET 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00115 183 SUPERFAMILY LigT-like 4 133 IPR009097 -
Pral5106g00115 183 Gene3D Cyclic phosphodiesterase 5 179 - -
Pral5106g00115 183 Pfam 2'-5' RNA ligase superfamily 41 158 - -
Pral5106g00115 183 PANTHER - 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00115 Pral-Chr5106 566792 568331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00115 1 183 Calmodulin-binding Proteins AT5G40190 72.131 1.07e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00115 - - cave:132181051 318.931