Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00113 ATGCATGTGTTGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGTCACCGCGACGACTGTAGCTCCCGCTGCCGATTCTTCATCATCCGAATTCATATGCAAAGATGGACGTGAGATCCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCTTTTATAGGAATAATTCGCAAATTAACATTGAAGAAAGAAGAAAGTCCGAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATCTGAAGCTTGCAAAAGGGGTCCAGTTGGAAGCTGCGCCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTAAGAGTGAGCGTTTATGGTGGCTAACTGATAAAAACTACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAGACAAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAACACCTCCACTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCGTCCTTTGGTTCACAGGGTAAAGGAAAGAAGAGAGAACGGGGTGATCAGGGATCTGATTCATCAAAAAGAGAACGATTAATCAAAACAGAGGATGGTGATACTGGTCAACATAGGCCAGAAAATATGCTAAAATCTGAGATTGCTAAAATTACTGACAACGGTGGTCTTGTGGACTTTGAGGGAGTTGAAAGACTGGTACAGCTCATGCAACCCGACAGTGCTGATAAAAAAATAGATTTGGCTGGGCGAATAATGCTTGCTGATGTAATAGCAGTCACAGATCGGTTTGACTGTCTTGGATGGTTTGTACAACTCAGGGGTCTGCCTGTATTGGATGAATGGCTGCAGGAGGTTCATAAGGGGAAAATTGGTGATGGTAATACGCCCAAAGAAAGCGACAAGTCTGTTGAAGAATTGCTGTTAGCTCTACTTCGTGCGTTGGATAAGCTTCCAGTGAACCTTCATGCTTTAAAGACATGTAATGTTGGAAAGTCTGTGAATCATTTGCGTACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGTGACTCAAAATCTGGATCTAGCCGGGGTGTCTCTTGGCCAGCAAAGCCTGCATCTTCTGAGGTGTCTCATGTTGGAAGTAGGAAAACAGGTGGATCTGCTGAGGTAGCTGCAAAGAGCTCTGGTATGCTGCTATCTGCATCCAAAAACTCCCAGGCTAAGATTAGCTCAGGTGAATCACTGTCCACTCTCGCATCTGCCACTTCTGCCACTACTAAAGCTACTACCGCCTCAGTAGCCTGTAATTTGAAGGAGCAAAACGTTAAACCTGGAGCTGGAACATCAGATTTACCCTTGACACCTATCAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCTCAAAACAACAGCTTATCTTGTTCTAGTGAACAAGCAAAAACTATCGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGTGAGCAAAATTCCTGGCAGTGCCTCTCGCCCCCGGAAATCAAGCAATGGTCTGCATGGTTCTGCTTTAACTGCAGTCCAGAAGGAGCCCCATCCTGGAAAAAGCTTGAGTAGAAACTCGGCCTCAGAGAAGGTTTCACCGAATCAACCCGCCCGTGAAAAATCACCTGACGTGCCTCTTCCTGATCATGGAAGTAATCAGAGACTGATCGTTAGGTTGCCAAACACTGGCCGAAGTCCTGCCAGGGGAGCTGGTGGGGGATGTGAAGATCCTGCAATTATGTCTGGCAAATCATCACCTCCTGGAGATAAGCATGAGAATGTGGATAGAAGAGTGAAATCCAAAACTGATGGTTCTCAGAATAATAATGTCACAAATATGGCCGCTGATGTTTGTGATGCTAACGATGCTGTGACTGACTATGAGGAAGGTAATGGCTCACCTACTGGTGAAGAATGCAGGGCCAGTGAAGATGGTGATAAACTCACGGAAACATCAAAGCCAACTAGTTCATCCGGATTTCTTTCCAGATCAGGGCAGACTTATGATGCATCCTTGAGCTCCATAAATGCATTAATTGAAAGTTGTGTGAAATTCTCTGAAGCAAGTCCCTCTGTGTCCCCTGTAGATGATGCTGGCATGAACCTACTTGCCACTGTAGCTGCTGGAGAAATATCTCGGTCAGAAAATGTGACGCCGGCAGTTTCTCCGGGGAGGAAGTCTCCTGCAGTAGATGAATCATGCTCAGGCAACGATAATAAGTTGCAACATTCAGGTGAAGCAGTTGGTTGCACTCCTGAACATTTGAAGGCTACCGAAGATCATGTAAACACCGTTGATCCATTGCAGCTCAAGAATGATGCAAGGCACACTGTAGGATCAAGATCATGTGATCTGTCTGAAGATGGCGAAACTACACAATCTGCTTGCAAAGAGAAAACTGGTGATGGTAAAAGTCAAACGAATTTGTCCCCTGCAGAGTTGTCGCGTAATGTGGAAGGTCCATTCTTAGGGCCTGAAACCAAAGAGGAAGCATCTGAAGCAGTATTGCCTGCTAAAAAGGAGAATGTTGCAGGGCCCGAGGGAGCTAGTTTGCTTCATGAGGAGAGGAAAATGGGAACTCATTGGGCTAAGAGCAGCAATAATTCAGACTCTAAAATAAAAACAAGGAGTTCTATTGATGAAGACCGGAAGGTTGATCATGTTAATGAGAGGAAGATGGAGAATGAAGCATCAGTTTCTGAAGGGCCTTCTGCAAGTCTAGAAATAGAGAAGGAAGTGTGTGAAAAATCACCTGAATCATCTACAGGTTTGGTTAATGAGAACCAGATTAGTGGGGAAAAAGTGGCAGGTAGTATCATCTCAATGCAAAAGCCCACTCCTCTGGCGGAAAAACAGCACGAGTTTATTGAGGGCAGAAATGAGAATGTTGTGGTACCACCTTCTGCTCCTAGTTATCCTTTGATGGAATCTAATGTTGTGAGTGCGGCTGACGTGAAACCATGTGAGATGGAACATAGTAAGGAGAGACAAAGGGATCTGGACTCATCAGGGCCTGCTTTCGACAACCAATGTACTGCAGATAATTTGGATAGAAAAGAAGTTCTTGGTTTCGGCACTGATTCATCAGTACAGTCTGAGTCTCCAAAACGTTCTGTACAAGAGAATGAAGTGCTAAAAAAGCCTTCTGGTTTTAATTTGGACAGAGTTATGTCTGATGGTGCGGCTGAACAACATGCCTCTGGTGTTAGTGATTCACCTGCTGCCAGAGAGCCGGATGTAGCAGTGAAGCTAGACTTTGATTTAAATGAGGGATTTCCTGTTGATGACGTGAATCAAGGGGATGTTGTGAGACAGGAAGAACCCATCACATCATCTGCAGTCCATGTTCCATGCCCATTGCCTTTTCCTGTTTCTTCGATGTCTGGGGGTTTCCATGCTTCGATTACTGTGGCTTCTGCTGCCAAGGGGCCTGTTATTCCACCTGAGAACCCATTGCGGAGTAAGGGGGAACTTAGGTGGAAAGGGTCAGCTGCTACCAGTGCATTCCGACCGGCAGAGCCCAGGAAAAACACAGAGCAGCCATTAAATACTAGTGATAATAGTGCTACCAAGCAAGGTCGTGCTCCTTTAGATTTTGATTTGAATGTGCCTGATCAAAGAAGTTTTGAGGATGTTGCTTCCCATGGCTCTTCAGAGACTTGTTTAGAATCCTTGCCTCGTGACCGTGGGACTGGAGGTCTTGATCTTGATTTAAATAGAGTTGATGAGACTCCTGATGCTGGTTGTTTTTCTGTGAGCAAACTGGATATTCCTTCTTTACCAACTAAACCTTCGTTATCTGGTGGTTTATCCAGCGGTGGAAATGTATCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGAAGCCCCAGCACGTAGCCAGCAGATAAAAAGTACCCTACCAATGCCTTCGACTGTTCATGGTGTTAGAACAAATCATGCTGATTTTGGGAATTATTCATCATGGTTTCCTTCAGGCACGTCCTATCCTGCAATCAATGTCCCACCACTTCTGCCTGGTAGAGGAGAGCAGAGCTTTGTTGCTGGTACTGGAGCACAGCGAATCTTGGGTCCTCCAGGTAGCACTTCTTTCGGTCCTGAAATCTATAGGGGGGCAGTTCTTCCATCATCTCCAGCTGTTGCTTATCCTCCCAGTACACCATTTCAGTACCCAGGATTTCCTTTTGAAACAAATTTTCCTTTGTCTTCAACTTCCTTTTCTGGCTGTTCAACACCCTTCATGGATTCCTCAACGGCAGGTGGACTTTGCTTTCCTGCCATGCCGTCACAGCTAGTTGGGCCTGGTGGTGTTGTCTCATCCAATTTTCCCCGTCCTTATGTTATGAGTCTTCCAGGTGGTACAAGTAATGTGATGCCTGAGAGTAGAAAATGGGGAGGTCACAGTCTGGATCTTAATTCAGGCCCTGGTGGTGCGGATACAGAACGGAGAGATGATAGAGTGCCTTCAGGGTTGAGGCAACCTCCTGTCTCAAGTTCCCAAGCTTTGATGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGAGGTGTTTTGAAGAGAAAGGAACCTGACGGTGGTTGGGATGGAGCTGATAGATACAACAGCTATAAACAACCCTCTTGGCAATAG 4854 0.4549 MHVLGGEEWKQRRHMWPVPVTATTVAPAADSSSSEFICKDGREIRVGDCALFKPPQDSPPFIGIIRKLTLKKEESPSLEVNWLYRPADLKLAKGVQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIKSERLWWLTDKNYINERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPPLKSGSDSVQNSSSFGSQGKGKKRERGDQGSDSSKRERLIKTEDGDTGQHRPENMLKSEIAKITDNGGLVDFEGVERLVQLMQPDSADKKIDLAGRIMLADVIAVTDRFDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNTPKESDKSVEELLLALLRALDKLPVNLHALKTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSSRGVSWPAKPASSEVSHVGSRKTGGSAEVAAKSSGMLLSASKNSQAKISSGESLSKXLASATSATTKATTASVACNLKEQNVKPGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSMSVSKIPGSASRPRKSSNGLHGSALTAVQKEPHPGKSLSRNSASEKVSPNQPAREKSPDVPLPDHGSNQRLIVRLPNTGRSPARGAGGGCEDPAIMSGKSSPPGDKHENVDRRVKSKTDGSQNNNVTNMAADVCDANDAVTDYEEGNGSPTGEECRASEDGDKLTETSKPTSSSGFLSRSGQTYDASLSSINALIESCVKFSEASPSVSPVDDAGMNLLATVAAGEISRSENVTPAVSPGRKSPAVDESCSGNDNKLQHSGEAVGCTPEHLKATEDHVNTVDPLQLKNDARHTVGSRSCDLSEDGETTQSACKEKTGDGKSQTNLSPAELSRNVEGPFLGPETKEEASEAVLPAKKENVAGPEGASLLHEERKMGTHWAKSSNNSDSKIKTRSSIDEDRKVDHVNERKMENEASVSEGPSASLEIEKEVCEKSPESSTGLVNENQISGEKVAGSIISMQKPTPLAEKQHEFIEGRNENVVVPPSAPSYPLMESNVVSAADVKPCEMEHSKERQRDLDSSGPAFDNQCTADNLDRKEVLGFGTDSSVQSESPKRSVQENEVLKKPSGFNLDRVMSDGAAEQHASGVSDSPAAREPDVAVKLDFDLNEGFPVDDVNQGDVVRQEEPITSSAVHVPCPLPFPVSSMSGGFHASITVASAAKGPVIPPENPLRSKGELRWKGSAATSAFRPAEPRKNTEQPLNTSDNSATKQGRAPLDFDLNVPDQRSFEDVASHGSSETCLESLPRDRGTGGLDLDLNRVDETPDAGCFSVSKLDIPSLPTKPSLSGGLSSGGNVSRDFDLNNGPGLDEVGTEAPARSQQIKSTLPMPSTVHGVRTNHADFGNYSSWFPSGTSYPAINVPPLLPGRGEQSFVAGTGAQRILGPPGSTSFGPEIYRGAVLPSSPAVAYPPSTPFQYPGFPFETNFPLSSTSFSGCSTPFMDSSTAGGLCFPAMPSQLVGPGGVVSSNFPRPYVMSLPGGTSNVMPESRKWGGHSLDLNSGPGGADTERRDDRVPSGLRQPPVSSSQALMEEQMKMFQVAGGVLKRKEPDGGWDGADRYNSYKQPSWQ 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 220 257 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1059 1149 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 514 579 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 722 736 - -
Pral5106g00113 1618 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 420 IPR035441 -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 659 673 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1334 1350 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 173 257 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1059 1073 - -
Pral5106g00113 1618 Pfam TFIIS helical bundle-like domain 357 406 IPR017923 -
Pral5106g00113 1618 SMART BAH_4 42 157 IPR001025 GO:0003682
Pral5106g00113 1618 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1618 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 500 736 - -
Pral5106g00113 1618 Gene3D - 26 267 IPR043151 -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 966 995 - -
Pral5106g00113 1618 ProSiteProfiles BAH domain profile. 42 157 IPR001025 GO:0003682
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 412 426 - -
Pral5106g00113 1618 CDD TFIIS_I 362 407 - -
Pral5106g00113 1618 SMART TFS2_5 329 408 IPR003617 GO:0005634
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1217 1318 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 869 885 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 191 219 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 850 949 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 785 817 - -
Pral5106g00113 1618 ProSiteProfiles TFIIS N-terminal domain profile. 323 409 IPR017923 -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 590 606 - -
Pral5106g00113 1618 Pfam BAH domain 44 152 IPR001025 GO:0003682
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1248 1263 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1528 1618 - -
Pral5106g00113 1618 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 410 IPR035441 -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 1334 1363 - -
Pral5106g00113 1618 MobiDBLite consensus disorder prediction 412 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00113 Pral-Chr5106 554136 561628 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral5106g00113 BAH 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00113 - - pcin:129308611 2743.38