Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00100 ATGGCGGGCGGAACTGAAGCTTTCCCTGATTTAGGAAGACACTGCCAACACGACGATTGCAACCTTCTCGATTTCCTCCCTTTCACCTGCGACGGTTGTCACCAGGTATTCTGTCTCGAGCATCAATCTTATAAATCCCACAACTGCCCTAAAGCTGATCATATCGGCCGGAAGGTTGTCGTCTGCGAAGTGTGTTCCATGTCCATCGAAACCACCGGTCACGTCGGAGAAGACGAGAAGGCGATCTTAGAGAGGCATGAGAAGTTGGGAGATTGTGACCCTAAGAAGAAGAAGAAACCCACTTGCCCTGTTAAGAGATGCAAGGAGATCTTGACGTTCTCTAGCACAAGCACGTGCAAAACGTGCCACGTGAAGGTGTGCCTCAAGCACCGTTTTCCGGCCGACCATGCTTGTAACAGAGCTGCTTCGCCTTCCACCTCGGCCGTTAATCCTGTCAACGAACGATGGAATGATCGGTTCCTAACTGCCCTGTCGTTGAGGAATGGAAAGGACTGTGCTAAAAGCCCCAGTTCTCCTCGTCCTCCCGCTACTCAATCTGTCGAAGCCTGCTGA 573 0.5166 MAGGTEAFPDLGRHCQHDDCNLLDFLPFTCDGCHQVFCLEHQSYKSHNCPKADHIGRKVVVCEVCSMSIETTGHVGEDEKAILERHEKLGDCDPKKKKKPTCPVKRCKEILTFSSTSTCKTCHVKVCLKHRFPADHACNRAASPSTSAVNPVNERWNDRFLTALSLRNGKDCAKSPSSPRPPATQSVEAC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00100 190 MobiDBLite consensus disorder prediction 170 190 - -
Pral5106g00100 190 Pfam AN1-like Zinc finger 15 53 IPR000058 GO:0008270
Pral5106g00100 190 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Pral5106g00100 190 Gene3D - 2 63 IPR035896 -
Pral5106g00100 190 SUPERFAMILY AN1-like Zinc finger 5 59 IPR035896 -
Pral5106g00100 190 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Pral5106g00100 190 Gene3D - 79 154 IPR035896 -
Pral5106g00100 190 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 175 - -
Pral5106g00100 190 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Pral5106g00100 190 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Pral5106g00100 190 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Pral5106g00100 190 SUPERFAMILY AN1-like Zinc finger 94 143 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00100 Pral-Chr5106 496447 497285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00100 2 172 C2H2 Transcription Factor Family AT3G28210 66.082 1.79e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00100 - - qsa:O6P43_034562 301.982