Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5106g00074 | ATGGTTGAGACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCCCCCCCTCCTTCCAACGCCAAACGATCTAAGGTGTCCGAGGACGCATCGTCAACCAGTCTCCCATCGGCTGAAATTTTTGGTCAGGTCAACGAATCTGGGAATGAATCTCGAGAGCCGGAGCTACGGCCATCTGATCTGCCAGATGCCGATTCTTTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGAGAAATCCCCTGCAGCGGCTGTCGAAGGCGAGGCTCTGGTGTCGCCGAGGTCTTCAGATGGAACTGCGGTGGAAGCGGAGAAATCAAAGTCAGCTAGTGTGGCGGCTCATGGGCGGTCTAAGAAACGCCCAACGAAATCCACAAAATCGAGCGCCAAGGCTGCCTGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCGCATCTGCCCATGCGCGGGCTCTTCACTGTTGGTCAAGGACGTCTGTGTGATTTGTGTCTTAAAGATCCTGCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTATAGGAGGTAAAGGTGTTGTCCAAGTTAATGGCAGGAACCACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTTACCAGTAATAATCTAACCACAGCAGGGGTACCCCCTTCTGTAAGTATATTGGAAGCCCGAAGTGCCCAAATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCAATATTAGCGTCTTTATCTAACCTTCACAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACTGGCGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGATAGTGTGGACAATGAAATGAAGGATGCCACCAAAAATGATGATTCAACTGAAGGTATTTTATCTGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCGGCCAATGAAAATCCTAGTCTTGACACCATGGGAGTAGATGCTGTTGTGGATGCAGATGTTGGGAAGGTAAATGGGACTGCCTATGAATTAAGGCCATTGTTGCGCATGCTTGCTGGTTCTAGTACTGAATTTGATTTGGGCAGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAACTCCTTAAGGATTTTGACCCCCCCACAATCTTGGCATCAACGAGGAGGCAAGCATTTAAGGAGAGTTTACAAGAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAATGTTTTGATTGCTTCTACACACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAAGAAACTTTATCGAAGGCCCTGGCAAAGCATTTTGGTGCCAGGCTGCTGATTGTGGATTCTCTTTCGTTGCCTGGTGGGACAACACCAAAAGAATCTGATTCCACTAAAGAAAGTTCTAGGCCTGAGAGAGCATCTATGTTTACAAAGCGAAGTGCACAGGCTGCCCCATTACAGCATAAGAAGCCGACTTCTAGTGTTGATGCTGAGATTGTAGGTGGATCGACATTAAGTTCTCAGGCCATGCTGAAGCAAGAGGTGTCTACTGCGTCATCCAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAACCAGTGTATCGCTAACGAATTATCCTTCTAGGGGCCCGAGTTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCCGGAGTGGATGACAATGACAAGCTTGCCATAAATGAAATTTTTGAGGTGGTCTCCAATCAAAGCAAAAGTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAGGCAATGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCAACAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAGAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTCGGGAGCAATCAGACTGCACTACTTGACCTTGCATTTCCGGATAATTTTAGTAGACTTCATGATAGAAGCAAAGAAACCCCCAAAACGATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTCACAATACAACTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAGTTGGAACGTGATGTTGAAACTATGAAAGCTCAATCAAATGTTGTCAGTATTCGTACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATTAAAGATCAAGCCCTAACAACTGAAACTGTGGAAAAAGTCATTGGCTGGGCTATAAGCCATCATTTTATGCATCAATCTGAAGATTCAATCAAGGACACTAAGCTTGTGATATCTACTGAGAGCATTAAGTATGGGCTGAACATTCTACAGGGCATTCTGAGTGAAAACAAAAACTTAAAGAAATCACTCAAGGACGTGGTTACTGAGAATGAGTTCGAGAAAAAACTTCTTGCTGATGTTATTCCACCCACTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGGATATTGCTCTTTGGGCCCCCTGGTACCGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATTGCTCCAAGTGTTATTTTCGTTGATGAGGTTGATAGCATGCTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGATTGCGTACAAAAGATAAAGAGCGCATACTTGTTCTTGCTGCGACAAATAGACCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTCCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCTGAACAGAGAGAAAATTCTCCGAGTCATCTTGGCAAAAGAAGACTTGGCACCTGATGTTGAGTTGGAAGCAATTGCAAATATGACTGATGGATATTCAGGAAGTGACCTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATCAGAGAAATCTTGGAGAAGGAAAAGAAGCAACTAATCTTTCAGGAGAGAGGTTTGGCGTTGTCTGAGAACAGACCTTTACCTGCATTATGTAGCAGTGCCGACATTCGACCCTTAAAGATGGAAGATTTCAAGTATGCACACGAGCAGGTGTGTGCCAGTGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGTGGGTCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA | 3777 | 0.4427 | MVETRRSSSSAKRSLSSPPPSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAAAVEGEALVSPRSSDGTAVEAEKSKSASVAAHGRSKKRPTKSTKSSAKAAWGKLLSQCSQNPHLPMRGLFTVGQGRLCDLCLKDPAVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNHHKNSRVILSGGDEVVFSSSGKHAYIFQQLTSNNLTTAGVPPSVSILEARSAQIKGMRIEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENATQNAEVLSVTSGHRDDSVDNEMKDATKNDDSTEGILSEKTVLASSAAAANENPSLDTMGVDAVVDADVGKVNGTAYELRPLLRMLAGSSTEFDLGSSISKILEERRDLRELLKDFDPPTILASTRRQAFKESLQEGILNPDDIDVSFESFPYFLSDTTKNVLIASTHIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTTPKESDSTKESSRPERASMFTKRSAQAAPLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTSVSLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVVSNQSKSGSLVLFMKDIEKAMVGNTEVLKSKLESLQQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAQSNVVSIRTVLNRFGLDCPDLETLCIKDQALTTETVEKVIGWAISHHFMHQSEDSIKDTKLVISTESIKYGLNILQGILSENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKQLIFQERGLALSENRPLPALCSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM | 1258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5106g00074 | 1258 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 947 | 1123 | - | - | |
Pral5106g00074 | 1258 | SUPERFAMILY | SMAD/FHA domain | 146 | 227 | IPR008984 | GO:0005515 | |
Pral5106g00074 | 1258 | Gene3D | - | 1121 | 1220 | - | - | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 531 | 572 | - | - | |
Pral5106g00074 | 1258 | Pfam | ATPase family associated with various cellular activities (AAA) | 989 | 1118 | IPR003959 | GO:0005524|GO:0016887 | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 316 | 337 | - | - | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Pral5106g00074 | 1258 | Gene3D | - | 947 | 1232 | IPR027417 | - | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 52 | 77 | - | - | |
Pral5106g00074 | 1258 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 431 | 1257 | - | - | |
Pral5106g00074 | 1258 | CDD | RecA-like_ATAD1 | 952 | 1118 | - | - | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 293 | 337 | - | - | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 299 | 314 | - | - | |
Pral5106g00074 | 1258 | Gene3D | - | 119 | 242 | - | - | |
Pral5106g00074 | 1258 | SMART | AAA_5 | 985 | 1122 | IPR003593 | GO:0016887 | |
Pral5106g00074 | 1258 | Pfam | AAA+ lid domain | 1142 | 1177 | IPR041569 | - | |
Pral5106g00074 | 1258 | ProSitePatterns | AAA-protein family signature. | 1092 | 1111 | IPR003960 | GO:0005524|GO:0016887 | |
Pral5106g00074 | 1258 | MobiDBLite | consensus disorder prediction | 1 | 131 | - | - | |
Pral5106g00074 | 1258 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 948 | 1230 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5106g00074 | Pral-Chr5106 | 394387 | 404547 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5106g00074 | 948 | 1180 | Calmodulin-binding Proteins | AT3G56690 | 40.506 | 3.00e-41 | 163 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5106g00074 | - | - | gmx:100801477 | 1907.11 |