Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00074 ATGGTTGAGACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCCCCCCCTCCTTCCAACGCCAAACGATCTAAGGTGTCCGAGGACGCATCGTCAACCAGTCTCCCATCGGCTGAAATTTTTGGTCAGGTCAACGAATCTGGGAATGAATCTCGAGAGCCGGAGCTACGGCCATCTGATCTGCCAGATGCCGATTCTTTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGAGAAATCCCCTGCAGCGGCTGTCGAAGGCGAGGCTCTGGTGTCGCCGAGGTCTTCAGATGGAACTGCGGTGGAAGCGGAGAAATCAAAGTCAGCTAGTGTGGCGGCTCATGGGCGGTCTAAGAAACGCCCAACGAAATCCACAAAATCGAGCGCCAAGGCTGCCTGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCGCATCTGCCCATGCGCGGGCTCTTCACTGTTGGTCAAGGACGTCTGTGTGATTTGTGTCTTAAAGATCCTGCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTATAGGAGGTAAAGGTGTTGTCCAAGTTAATGGCAGGAACCACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTTACCAGTAATAATCTAACCACAGCAGGGGTACCCCCTTCTGTAAGTATATTGGAAGCCCGAAGTGCCCAAATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCAATATTAGCGTCTTTATCTAACCTTCACAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACTGGCGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGATAGTGTGGACAATGAAATGAAGGATGCCACCAAAAATGATGATTCAACTGAAGGTATTTTATCTGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCGGCCAATGAAAATCCTAGTCTTGACACCATGGGAGTAGATGCTGTTGTGGATGCAGATGTTGGGAAGGTAAATGGGACTGCCTATGAATTAAGGCCATTGTTGCGCATGCTTGCTGGTTCTAGTACTGAATTTGATTTGGGCAGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAACTCCTTAAGGATTTTGACCCCCCCACAATCTTGGCATCAACGAGGAGGCAAGCATTTAAGGAGAGTTTACAAGAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAATGTTTTGATTGCTTCTACACACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAAGAAACTTTATCGAAGGCCCTGGCAAAGCATTTTGGTGCCAGGCTGCTGATTGTGGATTCTCTTTCGTTGCCTGGTGGGACAACACCAAAAGAATCTGATTCCACTAAAGAAAGTTCTAGGCCTGAGAGAGCATCTATGTTTACAAAGCGAAGTGCACAGGCTGCCCCATTACAGCATAAGAAGCCGACTTCTAGTGTTGATGCTGAGATTGTAGGTGGATCGACATTAAGTTCTCAGGCCATGCTGAAGCAAGAGGTGTCTACTGCGTCATCCAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAACCAGTGTATCGCTAACGAATTATCCTTCTAGGGGCCCGAGTTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCCGGAGTGGATGACAATGACAAGCTTGCCATAAATGAAATTTTTGAGGTGGTCTCCAATCAAAGCAAAAGTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAGGCAATGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCAACAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAGAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTCGGGAGCAATCAGACTGCACTACTTGACCTTGCATTTCCGGATAATTTTAGTAGACTTCATGATAGAAGCAAAGAAACCCCCAAAACGATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTCACAATACAACTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAGTTGGAACGTGATGTTGAAACTATGAAAGCTCAATCAAATGTTGTCAGTATTCGTACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATTAAAGATCAAGCCCTAACAACTGAAACTGTGGAAAAAGTCATTGGCTGGGCTATAAGCCATCATTTTATGCATCAATCTGAAGATTCAATCAAGGACACTAAGCTTGTGATATCTACTGAGAGCATTAAGTATGGGCTGAACATTCTACAGGGCATTCTGAGTGAAAACAAAAACTTAAAGAAATCACTCAAGGACGTGGTTACTGAGAATGAGTTCGAGAAAAAACTTCTTGCTGATGTTATTCCACCCACTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGGATATTGCTCTTTGGGCCCCCTGGTACCGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATTGCTCCAAGTGTTATTTTCGTTGATGAGGTTGATAGCATGCTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGATTGCGTACAAAAGATAAAGAGCGCATACTTGTTCTTGCTGCGACAAATAGACCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTCCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCTGAACAGAGAGAAAATTCTCCGAGTCATCTTGGCAAAAGAAGACTTGGCACCTGATGTTGAGTTGGAAGCAATTGCAAATATGACTGATGGATATTCAGGAAGTGACCTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATCAGAGAAATCTTGGAGAAGGAAAAGAAGCAACTAATCTTTCAGGAGAGAGGTTTGGCGTTGTCTGAGAACAGACCTTTACCTGCATTATGTAGCAGTGCCGACATTCGACCCTTAAAGATGGAAGATTTCAAGTATGCACACGAGCAGGTGTGTGCCAGTGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGTGGGTCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3777 0.4427 MVETRRSSSSAKRSLSSPPPSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAAAVEGEALVSPRSSDGTAVEAEKSKSASVAAHGRSKKRPTKSTKSSAKAAWGKLLSQCSQNPHLPMRGLFTVGQGRLCDLCLKDPAVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNHHKNSRVILSGGDEVVFSSSGKHAYIFQQLTSNNLTTAGVPPSVSILEARSAQIKGMRIEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENATQNAEVLSVTSGHRDDSVDNEMKDATKNDDSTEGILSEKTVLASSAAAANENPSLDTMGVDAVVDADVGKVNGTAYELRPLLRMLAGSSTEFDLGSSISKILEERRDLRELLKDFDPPTILASTRRQAFKESLQEGILNPDDIDVSFESFPYFLSDTTKNVLIASTHIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTTPKESDSTKESSRPERASMFTKRSAQAAPLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTSVSLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVVSNQSKSGSLVLFMKDIEKAMVGNTEVLKSKLESLQQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAQSNVVSIRTVLNRFGLDCPDLETLCIKDQALTTETVEKVIGWAISHHFMHQSEDSIKDTKLVISTESIKYGLNILQGILSENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKQLIFQERGLALSENRPLPALCSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00074 1258 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 947 1123 - -
Pral5106g00074 1258 SUPERFAMILY SMAD/FHA domain 146 227 IPR008984 GO:0005515
Pral5106g00074 1258 Gene3D - 1121 1220 - -
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 531 572 - -
Pral5106g00074 1258 Pfam ATPase family associated with various cellular activities (AAA) 989 1118 IPR003959 GO:0005524|GO:0016887
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 316 337 - -
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 1 51 - -
Pral5106g00074 1258 Gene3D - 947 1232 IPR027417 -
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 52 77 - -
Pral5106g00074 1258 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 431 1257 - -
Pral5106g00074 1258 CDD RecA-like_ATAD1 952 1118 - -
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 293 337 - -
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 299 314 - -
Pral5106g00074 1258 Gene3D - 119 242 - -
Pral5106g00074 1258 SMART AAA_5 985 1122 IPR003593 GO:0016887
Pral5106g00074 1258 Pfam AAA+ lid domain 1142 1177 IPR041569 -
Pral5106g00074 1258 ProSitePatterns AAA-protein family signature. 1092 1111 IPR003960 GO:0005524|GO:0016887
Pral5106g00074 1258 MobiDBLite consensus disorder prediction 1 131 - -
Pral5106g00074 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00074 Pral-Chr5106 394387 404547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00074 948 1180 Calmodulin-binding Proteins AT3G56690 40.506 3.00e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00074 - - gmx:100801477 1907.11