Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00073 ATGGTTGAGACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCCCCCCCTCCTTCCAACGCCAAACGATCTAAGGTGTCCGAGGACGCATCGTCAACCAGTCTCCCATCGGCTGAAATTTTTGGTCAGGTCAACGAATCTGGGAATGAATCTCGAGAGCCGGAGCTACGGCCATCTGATCTGCCAGATGCCGATTCTTTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGAGAAATCCCCTGCAGCGGCTGTCGAAGGCGAGGCTCTGGTGTCGCCGAGGTCTTCAGATGGAACTGCGGTGGAAGCGGAGAAATCAAAGTCAGCTAGTGTGGCGGCTCATGGGCGGTCTAAGAAACGCCCAACGAAATCCACAAAATCGAGCGCCAAGGCTGCCTGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCGCATCTGCCCATGCGCGGGCTCTTCACTGTTGGTCAAGGACGTCTGTGTGATTTGTGTCTTAAAGATCCTGCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTATAGGAGGTAAAGGTGTTGTCCAAGTTAATGGCAGGAACCACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTTACCAGTAATAATCTAACCACAGCAGGGGTACCCCCTTCTGTAAGTATATTGGAAGCCCGAAGTGCCCAAATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCAATATTAGCGTCTTTATCTAACCTTCACAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACTGGCGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGATAGTGTGGACAATGAAATGAAGGATGCCACCAAAAATGATGATTCAACTGAAGATGCTGTTGTGGATGCAGATGTTGGGAAGGTAAATGGGACTGCCTATGAATTAAGGCCATTGTTGCGCATGCTTGCTGGTTCTAGTACTGAATTTGATTTGGGCAGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAACTCCTTAAGGATTTTGACCCCCCCACAATCTTGGCATCAACGAGGAGGCAAGCATTTAAGGAGAGTTTACAAGAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAATGTTTTGATTGCTTCTACACACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAAGAAACTTTATCGAAGGCCCTGGCAAAGCATTTTGGTGCCAGGCTGCTGATTGTGGATTCTCTTTCGTTGCCTGGTGGGACAACACCAAAAGAATCTGATTCCACTAAAGAAAGTTCTAGGCCTGAGAGAGCATCTATGTTTACAAAGCGAAGTGCACAGGCTGCCCCATTACAGCATAAGAAGCCGACTTCTAGTGTTGATGCTGAGATTGTAGGTGGATCGACATTAAGTTCTCAGGCCATGCTGAAGCAAGAGGTGTCTACTGCGTCATCCAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAACCAGTGTATCGCTAACGAATTATCCTTCTAGGGGCCCGAGTTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCCGGAGTGGATGACAATGACAAGCTTGCCATAAATGAAATTTTTGAGGTGGTCTCCAATCAAAGCAAAAGTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAGGCAATGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCAACAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAGAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTCGGGAGCAATCAGACTGCACTACTTGACCTTGCATTTCCGGATAATTTTAGTAGACTTCATGATAGAAGCAAAGAAACCCCCAAAACGATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTCACAATACAACTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAGTTGGAACGTGATGTTGAAACTATGAAAGCTCAATCAAATGTTGTCAGTATTCGTACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATTAAAGATCAAGCCCTAACAACTGAAACTGTGGAAAAAGTCATTGGCTGGGCTATAAGCCATCATTTTATGCATCAATCTGAAGATTCAATCAAGGACACTAAGCTTGTGATATCTACTGAGAGCATTAAGTATGGGCTGAACATTCTACAGGGCATTCTGAGTGAAAACAAAAACTTAAAGAAATCACTCAAGGACGTGGTTACTGAGAATGAGTTCGAGAAAAAACTTCTTGCTGATGTTATTCCACCCACTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGGATATTGCTCTTTGGGCCCCCTGGTACCGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATTGCTCCAAGTGTTATTTTCGTTGATGAGGTTGATAGCATGCTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGATTGCGTACAAAAGATAAAGAGCGCATACTTGTTCTTGCTGCGACAAATAGACCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTCCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCTGAACAGAGAGAAAATTCTCCGAGTCATCTTGGCAAAAGAAGACTTGGCACCTGATGTTGAGTTGGAAGCAATTGCAAATATGACTGATGGATATTCAGGAAGTGACCTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATCAGAGAAATCTTGGAGAAGGAAAAGAAGCAACTAATCTTTCAGGAGAGAGGTTTGGCGTTGTCTGAGAACAGACCTTTACCTGCATTATGTAGCAGTGCCGACATTCGACCCTTAAAGATGGAAGATTTCAAGTATGCACACGAGCAGGTGTGTGCCAGTGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGTGGGTCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3696 0.4426 MVETRRSSSSAKRSLSSPPPSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAAAVEGEALVSPRSSDGTAVEAEKSKSASVAAHGRSKKRPTKSTKSSAKAAWGKLLSQCSQNPHLPMRGLFTVGQGRLCDLCLKDPAVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNHHKNSRVILSGGDEVVFSSSGKHAYIFQQLTSNNLTTAGVPPSVSILEARSAQIKGMRIEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENATQNAEVLSVTSGHRDDSVDNEMKDATKNDDSTEDAVVDADVGKVNGTAYELRPLLRMLAGSSTEFDLGSSISKILEERRDLRELLKDFDPPTILASTRRQAFKESLQEGILNPDDIDVSFESFPYFLSDTTKNVLIASTHIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTTPKESDSTKESSRPERASMFTKRSAQAAPLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTSVSLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVVSNQSKSGSLVLFMKDIEKAMVGNTEVLKSKLESLQQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAQSNVVSIRTVLNRFGLDCPDLETLCIKDQALTTETVEKVIGWAISHHFMHQSEDSIKDTKLVISTESIKYGLNILQGILSENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKQLIFQERGLALSENRPLPALCSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 504 545 - -
Pral5106g00073 1231 Pfam AAA+ lid domain 1115 1150 IPR041569 -
Pral5106g00073 1231 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 404 1230 - -
Pral5106g00073 1231 SUPERFAMILY SMAD/FHA domain 146 227 IPR008984 GO:0005515
Pral5106g00073 1231 CDD RecA-like_ATAD1 925 1091 - -
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 296 337 - -
Pral5106g00073 1231 Pfam ATPase family associated with various cellular activities (AAA) 962 1091 IPR003959 GO:0005524|GO:0016887
Pral5106g00073 1231 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 920 1096 - -
Pral5106g00073 1231 Gene3D - 119 242 - -
Pral5106g00073 1231 ProSitePatterns AAA-protein family signature. 1065 1084 IPR003960 GO:0005524|GO:0016887
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 316 337 - -
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 1 51 - -
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 52 77 - -
Pral5106g00073 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 921 1203 IPR027417 -
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 299 314 - -
Pral5106g00073 1231 Gene3D - 920 1205 IPR027417 -
Pral5106g00073 1231 SMART AAA_5 958 1095 IPR003593 GO:0016887
Pral5106g00073 1231 MobiDBLite consensus disorder prediction 1 131 - -
Pral5106g00073 1231 Gene3D - 1094 1193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00073 Pral-Chr5106 394387 404547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00073 921 1153 Calmodulin-binding Proteins AT3G56690 40.506 2.78e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00073 - - gmx:100801477 1897.09