Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00053 ATGCTAGGAGTTTCCAGAATACTGGAGCATGAGAAATGTGAAAGCTACTTGGTTTTCAGCGGCGAAACTGCCCTTGCAGACTCCTTCCGGACATTTTTATATTTTCTTGGTCTTGCTTATTGTTTCATTGGATTATCAGCTGTAACTGCTCGATTCTTCCGCTCTATGGAAAATATTGTTAAGCACAAAAGGGAGGTGGTAGAAATAGATCCCGTTACTCATGCTGAAGTTATTAGACATGACAAAGTATGGAATTACACAATTGCAGATATTAGCTTACTGGCTTTCGGAACTAGCTTTCCTCAGATATCATTGGCCACCATTGATGCTATACAAAACATAGGAAACCTGTATGCTGGAGGTCTGGGTCCTGGAACTCTTGTTGGTTCTGCTGCTTTCGACCTTTTCCCAATCCATGCTGTTTGTGTAGTTGTTCCAAAAGCTGGAGAGCTAAAAAAGATTGCTGATTTAGGAGTATGGCTCGTGGAATTATTTTGGTCCTTCTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAATGTGGTGACTTTGTGGGAGGCCTTGTTGACAGTAGCGCAGTATGGATTGCTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCTTATATTTCTTTACCTCTTGCAAGAAGTGAGAGGCCAGAGGATTGGGTGCCGGAAGAGACAGATTCTTCCAAACAAGAAACTCATGACCATGAGGAGTTCCCTGAGATCATTTATGACAGTGAAGAAAATAAGGATGTTGTCGACATTTTTTCCATTCATTCAAAAAATGAGACTGGCAATTACCAGACGGGGCTTAATGTGATGAAGGATCCTTTGTATCAAAGAGTGCCTTCAACAGAGAATGATGCTGAAACCATTGACGATGCTACGGAAACGGTGTTGGGTGATACTTATTTTCTTAGACTTTGGAAACAGCAATTTGTGGATGCAATTATGTTGGAAAGCAAAAATTCAAAAAAGCTGGACAACATCTATCTCCGCGCAGCTAGAATTTTCTGGCAATTGCTCCTTTTACCATGGAGACTTCTGTTTGCTATTGTTCCTCCATGTCATATAGCTCATGGTTGGATTTCATTCATCTGCTCTCTACTTTTCATCAGTGGGATAGCTTACATCGTGACTAAGCTTACAGATATGATTAGTTGTGTTACAGGAATAAATCCTTATGTCATAGCATTTACAGCATTAGCCAGCGGAACCTCCTGGCCTGATTTAGTAGCAAGCAAGATAGCTGCTGAACGCCAAACAACTGCGGACTCTGCCATCGCAAACATCACTTGCAGTAATTCAGTGAATATATACGTGGGCATTGGGGTTCCATGGCTGATTGACACCGCATATAACTTTCTAGCGTATAGACAGCCTCTGCGGATCCAGAATGCCTCAAGCCTAAGCTTTTCATTGCTTGTTTTCTTCGTTACCTCTTTTGGGTGCATCACGGTTTTGGTTATTAGGCGTCTAGTTTTTGGTGCAGAGCTTGGAGGGCCAAGGCGCTGGGCGTGGCTTACCTGCATATATTTCATGTTGCTCTGGATCATTTTTGTTCTGCTATCTTCTCTCCGGGTTTCTGGGGTCATATAA 1620 0.4222 MLGVSRILEHEKCESYLVFSGETALADSFRTFLYFLGLAYCFIGLSAVTARFFRSMENIVKHKREVVEIDPVTHAEVIRHDKVWNYTIADISLLAFGTSFPQISLATIDAIQNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVAQYGLLLIHAYAQDKRWPYISLPLARSERPEDWVPEETDSSKQETHDHEEFPEIIYDSEENKDVVDIFSIHSKNETGNYQTGLNVMKDPLYQRVPSTENDAETIDDATETVLGDTYFLRLWKQQFVDAIMLESKNSKKLDNIYLRAARIFWQLLLLPWRLLFAIVPPCHIAHGWISFICSLLFISGIAYIVTKLTDMISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLIDTAYNFLAYRQPLRIQNASSLSFSLLVFFVTSFGCITVLVIRRLVFGAELGGPRRWAWLTCIYFMLLWIIFVLLSSLRVSGVI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00053 539 Gene3D - 322 532 IPR044880 -
Pral5106g00053 539 Gene3D - 86 223 IPR044880 -
Pral5106g00053 539 PANTHER SODIUM/CALCIUM EXCHANGER 11 234 - -
Pral5106g00053 539 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Pral5106g00053 539 Pfam Sodium/calcium exchanger protein 368 531 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00053 Pral-Chr5106 310098 315531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00053 5 539 Antiporters AT2G47600 70.686 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00053 K03452 - gmx:100792839 846.654