Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00044 ATGAGAAGCAACCCAGAGCTGTCACTGCTGGCATTAATGGCCGTGTGCGTCCTGATTCTGACGTCACGCCAAATTGAAGCGCAAGAAGAAGAATTGAGAGGGGAGGCACTGATCAACAAGGTATGCGAGAAAACGCCATCGAAGGATGTTTGCGCAGAAACACTAAAGAAAGACCCGAGAAGCCAGACGGGAGGGCTAAAAGAGATGGCGTTGATATCAGTTCAGGCCGCCAAGGACAACGCAACAGATATAATAAGTCACCTGAAGGTGCTGGTGGTCGATGACAGTCTGTCGCCGGATGTCCAACAGGGCATGTCGGATTGCTTGGATGTACTGGGAGACGCACAAGAGCAGCTTAACACAGCGACGGCGGCCATGCTGGTGAAGATCGGAGAGGACGCCGAAAAATGGCTGCAGGCGGCGGTGGACGCGGTGTCTACCTGTGAGGGTTACCTCCACGGAGATGATCATCTCCTGTTGCACAAGGAGGACAACTTCCGTCTCATGTGCAACATTTCCTTGTCCATCTGCAAGGCCTTGGACAACAACCAAGTTTAG 558 0.5269 MRSNPELSLLALMAVCVLILTSRQIEAQEEELRGEALINKVCEKTPSKDVCAETLKKDPRSQTGGLKEMALISVQAAKDNATDIISHLKVLVVDDSLSPDVQQGMSDCLDVLGDAQEQLNTATAAMLVKIGEDAEKWLQAAVDAVSTCEGYLHGDDHLLLHKEDNFRLMCNISLSICKALDNNQV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00044 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 175 - -
Pral5106g00044 185 NCBIfam pectinesterase inhibitor domain 8 180 IPR006501 GO:0004857
Pral5106g00044 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 180 IPR035513 -
Pral5106g00044 185 Pfam Plant invertase/pectin methylesterase inhibitor 37 176 IPR006501 GO:0004857
Pral5106g00044 185 SMART PMEI_2 33 176 IPR006501 GO:0004857
Pral5106g00044 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00044 Pral-Chr5106 256650 257207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00044 7 148 Carbohydrate Esterase AT5G53370 23.841 2.61e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00044 - - pcin:129305934 299.671