Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00042 ATGATTCTGGGAGATGGAATCAATCGCACAGTGATCACCGGCAATCGCAGTGTTGCGGATGGGTGGACAACATTCAACTCAGCAACATTTGTTGTGGTAGGACAAGGATTCGTAGCAGTGAACATAACAATCAGAAACACGGCAGGGCCGATCAAAAGGCAAGCAGTTGCATTAAGAAGTGGGGCAGACTTGTCTGTCTTCTACAGCTGCAGTTTCGAGGGTTACCAAGACACCCTGTATACGCATTCTATGCGACAATTTTATAGAGAATGTGACATATATGGAACGGTCGACTTCATATTCGGGAACGCGGCCGTCGTATTACAAAACTGCAACATATATCCACGGTTGCCCATGACGGGACAATTCAATGCTATCACAGCGCAAGGTCGAGTTGACCCAAACCAGAACACAGGCATCTCCATACAAAACGCCACTATAAAGGCTGCGGACGATCTCATGGATGCTCTCCAGAACGCGACGGCCGTGAGGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGACGGTTTATATGCAGAGTTTCATGGACAGTTTGATAGAGGCTGCGGGCTGGCGGGAATGGGATGGAGATTTTGCTTTGGATACGCTGTACTACGCAGAACACGACAACAGAGGGCCCGGTTCGGACACTGGGAACAGAGTGACGTGGCCTGGTTATCATCTGATTAATGCTACGGATGCCGCTAATTTCACGGCGGATAACTTCCTGCAGGCGGATGCTTGGCTGGCTCGGACGGGCGTCCCCTTCTTCACTGGTTTGATTTAG 792 0.5038 MILGDGINRTVITGNRSVADGWTTFNSATFVVVGQGFVAVNITIRNTAGPIKRQAVALRSGADLSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMTGQFNAITAQGRVDPNQNTGISIQNATIKAADDLMDALQNATAVRTYLGRPWKQYSRTVYMQSFMDSLIEAAGWREWDGDFALDTLYYAEHDNRGPGSDTGNRVTWPGYHLINATDAANFTADNFLQADAWLARTGVPFFTGLI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00042 263 Pfam Pectinesterase 1 248 IPR000070 GO:0030599|GO:0042545
Pral5106g00042 263 FunFam Pectinesterase 1 262 - -
Pral5106g00042 263 ProSitePatterns Pectinesterase signature 2. 93 102 IPR033131 -
Pral5106g00042 263 PANTHER PECTINESTERASE 1 252 - -
Pral5106g00042 263 SUPERFAMILY Pectin lyase-like 1 261 IPR011050 -
Pral5106g00042 263 Gene3D - 1 262 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00042 Pral-Chr5106 247375 249092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00042 1 263 Carbohydrate Esterase AT1G02810 75.379 3.81e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00042 K01051 - jre:118343822 431.795