Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00041 ATGGCTTTCAAGCTCTTGCCCTTCCTGGCTCTCACATCGTTTTACATATTCCTTACCTCGTTTGTGTCGTTTTCTGTGGCAGTGCGCCATCGTCAGCATGGAAGAGCTCACGTTCCTCCAGAAACCGTCTGCCACAACACACAACACCCTTCTTATTGCAAACATGTTATTGCTCATCACCACGGCAACAACGTCTATGACTATGGACGTATCTCTTTTAGGAAATCCTTATCTCACAGCCACAAGTTCCTCAACTTAGTCGACTCCTATCTTCTGTCTCCCTCCTATTTGTCTCAGTCTACAATTCGAGCTCTTGAAGATTGTCAATCCCTCTCTCAACTAACCTATGAATTCTTGTCGACTTCCTACCCCACCGTCAATCGATCCAGCTATGTTCTTCCCTATTCTCAAGCCGACGATATTCAAACTATGCTCAGTGCCGTTCTCACAAACCAACAGACTTGTTTGGATGGCCTTCAGACGACGGCTTCAGATCCAAAAGTGAAGGACGATCTTTCCGTCCCACTCTTGAACGACACTAACCTTCACAGTGTCTCTCTTGCTCTGTTCGTGAAGGGCTGGGTCCCTAAAAAGAAGAACAGACCGTCATCGCACGAAGACACGGGAGGAAATTGCTCCAGACTCTGA 648 0.4707 MAFKLLPFLALTSFYIFLTSFVSFSVAVRHRQHGRAHVPPETVCHNTQHPSYCKHVIAHHHGNNVYDYGRISFRKSLSHSHKFLNLVDSYLLSPSYLSQSTIRALEDCQSLSQLTYEFLSTSYPTVNRSSYVLPYSQADDIQTMLSAVLTNQQTCLDGLQTTASDPKVKDDLSVPLLNDTNLHSVSLALFVKGWVPKKKNRPSSHEDTGGNCSRL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00041 215 FunFam Pectinesterase 41 192 - -
Pral5106g00041 215 PANTHER PECTINESTERASE 27 198 - -
Pral5106g00041 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 192 IPR035513 -
Pral5106g00041 215 Pfam Plant invertase/pectin methylesterase inhibitor 41 188 IPR006501 GO:0004857
Pral5106g00041 215 NCBIfam pectinesterase inhibitor domain 14 189 IPR006501 GO:0004857
Pral5106g00041 215 CDD PMEI-like_3 42 190 - -
Pral5106g00041 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 190 IPR035513 -
Pral5106g00041 215 SMART PMEI_2 35 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00041 Pral-Chr5106 247258 247990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00041 42 205 Carbohydrate Esterase AT4G02330 50.595 1.65e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00041 K01051 - gmx:100792847 204.142