Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00040 ATGGACCTGAAAATCCAGCAAATTCTCGCGGTCATATTTCCATTTAACACCATCATAATGGCTTCGAATGTCTTGTTCAAAGCCACATTGTCAACTTTCCTTCTTCCCCTCTTCGCATTCCTTGCTACTGCAGATGAATTCATAACCAACCCTGTTCCGTCAGATGCCATATGCAACGCCACCCCAGACCCATCTTATTGCAGAGCCGTGCTTCCATGGAAACACGCTCAAATGCACGACTTTGGCAGGTTCTCCATCCAAAAATCGCTATTTCAAACCCGTCACTTTTCGAACTTTGCCAAGTCCTATCTTCTTAACCACTCCACCACTTTATCCCAGGGCACAATTCGTGCAATTCAAGACTGTATATTTCTCTCCGAACTTAACGTGGAATACTTATCCAAGTCCAATGAGATTGTCATGAAGGCTCCTGAAACTCTCTCAAGCTCCCAAGCTGATGATGCCCATTCCTGGCTCAGTGCCATTTTAACGAACCACCAGACTTGTTTGGGCGGAATAATCAGCACGACTTCCGATATGAGCACTGAGAATGGGCTTTTAGGCCACCTCTCTGATGACACTAAGCTCCACAGTCTGTCTCTGGCTCTGTTTACAAAGGGGTGGGTACATGAGGAAAAGAGCAAGCCAATCTGGAATTCCAAAGGGTGGCATGCAGGTTTTCGAAATGGTCGTTTACCTTTGAAGATGTCAAATAGAACGAGAGCCATCTATGACTCAATCAGAGGCAGAAAGGAGCATGAAGACGATGAAAATGACGAAGAGAGTGTTCTGATTAGTGACATAGTAATTGTGAGTCAAGACGGGAGTGGAAATTTCTCCACCATCAACGATGCCGTCGCTGCAGCTCCGATTAACAACAATGTAAGTGATGGGTATTTCTTGATTTATGTCACAGAGGGCGTGTATGAAGAATACGTGTCCATCCCCATCAACAAGCCGTATCTCATGATGATCGGAGATGGAATCAATCGCACAATTATCACGGGCAACCACAGCGTCGGCGATGGCTGGACAACATTCAATTCGCCAACATTTGCTGTGGTAGCAACGGGGTTTGTAGCAGCAAGAATGACATTCAGAAACACAGCAGGGCCAAGCAAGTTTCAAGCAGTAGCAATGAGAAGTGGGGCAGACCAATCCACGTTCTACAGGTGCAGCTTTGAAGGGTACCAGGACACTCTGTATCCACATTCACTGAGGCAGTTTTACAGAGAATGCGACATCTACGGCACAATAGATTTCATACTTGGAAACGCAGCAGTTGTTCTGCAGAACTGCAACATCTATGCTCGCCTTCCATTACAGGGACAGTTTAATCCCATCACTGCTCAGGGACGAACAGACCCAAATCAGAACACAGGCATTTCCATCCATAACTGCACCATTAAAGCTGCCGATGACTTAGCCGCGAGTGGTGGAAGCGTAAAGACTTATCTTGGAAGGCCATGGCAGCAGTATTCGAGGACAGTTGTGATGCAGTCGTTCTTGGATGGTCTGATTGATCCTGCAGGGTGGTCTGCATGGAGTGGGGACTTCGCACTTGACACTTTGTATTACGCTGAGTTTGGGAACAAGGGACCTGGAGCTAATACTAGTGATAGGGTGACCTGGCCGGGTTACCATGTGATTAATGCTACGGATGCAGCTAACTTCGCAGCTTCTAACTTTCTGCAGGCGGATGATTGGTTGCCTCGGACTGGAGTTCCCTATCTGGATGGGCTCTTCACGGCAAACTAA 1758 0.4704 MDLKIQQILAVIFPFNTIIMASNVLFKATLSTFLLPLFAFLATADEFITNPVPSDAICNATPDPSYCRAVLPWKHAQMHDFGRFSIQKSLFQTRHFSNFAKSYLLNHSTTLSQGTIRAIQDCIFLSELNVEYLSKSNEIVMKAPETLSSSQADDAHSWLSAILTNHQTCLGGIISTTSDMSTENGLLGHLSDDTKLHSLSLALFTKGWVHEEKSKPIWNSKGWHAGFRNGRLPLKMSNRTRAIYDSIRGRKEHEDDENDEESVLISDIVIVSQDGSGNFSTINDAVAAAPINNNVSDGYFLIYVTEGVYEEYVSIPINKPYLMMIGDGINRTIITGNHSVGDGWTTFNSPTFAVVATGFVAARMTFRNTAGPSKFQAVAMRSGADQSTFYRCSFEGYQDTLYPHSLRQFYRECDIYGTIDFILGNAAVVLQNCNIYARLPLQGQFNPITAQGRTDPNQNTGISIHNCTIKAADDLAASGGSVKTYLGRPWQQYSRTVVMQSFLDGLIDPAGWSAWSGDFALDTLYYAEFGNKGPGANTSDRVTWPGYHVINATDAANFAASNFLQADDWLPRTGVPYLDGLFTAN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00040 585 Pfam Plant invertase/pectin methylesterase inhibitor 56 184 IPR006501 GO:0004857
Pral5106g00040 585 SMART PMEI_2 49 203 IPR006501 GO:0004857
Pral5106g00040 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 206 IPR035513 -
Pral5106g00040 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 206 IPR035513 -
Pral5106g00040 585 Pfam Pectinesterase 269 567 IPR000070 GO:0030599|GO:0042545
Pral5106g00040 585 CDD PMEI-like_3 56 208 - -
Pral5106g00040 585 FunFam Pectinesterase 263 581 - -
Pral5106g00040 585 PANTHER PECTINESTERASE 35 571 - -
Pral5106g00040 585 Gene3D - 263 581 IPR012334 -
Pral5106g00040 585 SUPERFAMILY Pectin lyase-like 265 579 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00040 Pral-Chr5106 243004 245072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00040 29 583 Carbohydrate Esterase AT4G02330 57.168 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00040 K01051 - qsa:O6P43_007198 766.918