Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00034 ATGTGTGGTGGTGCCATCATCGCCGACTTCATCCCCCGTCACCGTGGCCGCCGTCTTACCGCCTCTGACATCTGGCCCAACTCTTTCGGCAAGCCAAATGACGACTCCGACTTCGACTTCCATTTTCCTCAGCCAGGCCACTCTGTCTCCCGCAAATCAACCCATCCTTCCCCAGTTGATCAGCAAGCCGAGAAACCCGTGAAGAGGCAGAGGAAGAACCTCTACCGTGGGATCAGGCAGCGTCCCTGGGGTAAATGGGCCGCGGAGATTCGCGACCCCAGGAAGGGGGTTCGTGTTTGGCTTGGCACCTTCAACACTGCTGAAGAAGCCGCCAGGGCCTATGACAGAGAAGCTCGAAGAATCCGCGGCAAGAAAGCCAAAGTCAATTTCCCCAATGAAGACGATGCCTACTCCCTTCAGGCTCGCCGTAATAATCCACCGCCTCCGCTCCGATCCCCCATTTCTCCCCTGTATCCGCAACAGTACGGCTCAAACTTGAACAATGTGCCTAAAAGTTTCAGTTTGGAGTTTGGCTATGATCTGAACCAGGCGGGCACAATTCCTTCCTTCGGATTCGACACCAATCCAACTCTCGTTTCTGGAGATAAGAACTCTGGATGCGGGTCAGGGTCAGGGTCAGGGTCAGTGTCAGTGTCCGAGTGTGCCTACTCCAGGATGCAACTGCTGGACTCGAGTCACAAAGGAAACGGCTATTCCTGTGAGGATTCGAACATGGACGTGGAAGGAAAAGCGAACACGGTGGTGACGGAAGCGGAGGAAGAGAAGAACGAGATAGAGAAGCTGTCGGAGGAGCTAATGGCGTACGAGAACTGCATGAAGTTCTATCAGATTCCATATTATGACGGGCAATCGACGGCGTCCAATAATGTACAGGAGAACGTGGTGGGCGATCTGTGGAGCTTCGACGATGAGGCCGTCCAGGTTTCGGTGACGTCATCGGCCCTGTGA 969 0.5459 MCGGAIIADFIPRHRGRRLTASDIWPNSFGKPNDDSDFDFHFPQPGHSVSRKSTHPSPVDQQAEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARRIRGKKAKVNFPNEDDAYSLQARRNNPPPPLRSPISPLYPQQYGSNLNNVPKSFSLEFGYDLNQAGTIPSFGFDTNPTLVSGDKNSGCGSGSGSGSVSVSECAYSRMQLLDSSHKGNGYSCEDSNMDVEGKANTVVTEAEEEKNEIEKLSEELMAYENCMKFYQIPYYDGQSTASNNVQENVVGDLWSFDDEAVQVSVTSSAL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00034 322 Pfam AP2 domain 75 123 IPR001471 GO:0003700|GO:0006355
Pral5106g00034 322 CDD AP2 75 132 IPR001471 GO:0003700|GO:0006355
Pral5106g00034 322 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Pral5106g00034 322 MobiDBLite consensus disorder prediction 132 163 - -
Pral5106g00034 322 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
Pral5106g00034 322 Coils Coil 251 278 - -
Pral5106g00034 322 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Pral5106g00034 322 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Pral5106g00034 322 PANTHER DNA-BINDING DOMAIN 56 239 IPR044808 GO:0003700|GO:0009873
Pral5106g00034 322 MobiDBLite consensus disorder prediction 35 74 - -
Pral5106g00034 322 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Pral5106g00034 322 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Pral5106g00034 322 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00034 Pral-Chr5106 203121 204466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00034 1 132 AP2-EREBP Transcription Factor Family AT3G16770 56.204 5.14e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5106g00034 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00034 K09286 - gmx:100780763 336.65