Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00029 ATGTCTGACGTTGTTGACCCTTGCGGTGGTTGTTATTACTCTGTGCTTGGGATAAGCAAGCAGGCCACCGATTGTGAAATCCGAGGCGCTTATCGTAAAATGGCTCTGAAATGGCATCCGGATAGGTGGACTAGAGAGCCAAAGCTTGCTACAGAAGCTAAAAGACGGTTTCAGCAAATTCAAGAGGCTTATTCGGTTTTGTCTAATAAAGGGAAGAGAACCATATATGATGCTGGCTTGTTTGGTTTCATCGGAGACGACGACGAGGGATTCGTTGATTTCATGCAAGAACTGATCTTGATGACGCAGACAGAGAGCCCCCAGGAACACACATTGGAGGATCTTGAGAGACTGATGATGGGCATGATGGAGGACCACAGTGAAGGAACGGGGATATCTGAGTTTCAATCCACCACTCCCACGAAAAAGATTCGAATCAAATGA 444 0.464 MSDVVDPCGGCYYSVLGISKQATDCEIRGAYRKMALKWHPDRWTREPKLATEAKRRFQQIQEAYSVLSNKGKRTIYDAGLFGFIGDDDEGFVDFMQELILMTQTESPQEHTLEDLERLMMGMMEDHSEGTGISEFQSTTPTKKIRIK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00029 147 MobiDBLite consensus disorder prediction 128 147 - -
Pral5106g00029 147 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pral5106g00029 147 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pral5106g00029 147 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pral5106g00029 147 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pral5106g00029 147 CDD DnaJ 11 69 IPR001623 -
Pral5106g00029 147 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Pral5106g00029 147 SMART dnaj_3 10 72 IPR001623 -
Pral5106g00029 147 PANTHER PUTATIVE, EXPRESSED-RELATED 10 134 - -
Pral5106g00029 147 MobiDBLite consensus disorder prediction 130 147 - -
Pral5106g00029 147 Gene3D DnaJ domain 6 82 IPR036869 -
Pral5106g00029 147 Pfam DnaJ domain 12 77 IPR001623 -
Pral5106g00029 147 SUPERFAMILY Chaperone J-domain 11 83 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00029 Pral-Chr5106 179853 181145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00029 11 78 C2H2 Transcription Factor Family AT1G74250 44.928 1.07e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00029 - - qsu:112024783 180.259