Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00021 ATGGCCAAAGCAAATGCTAAGGAAAAATCCACTTCCGCTGCTCTCCATCCCCCCTATTTCCATATGATATCGGACGCCATTTCTACGCTGAACGATCGCACGGGTTCCAGTCAGCAAGCAATTTCCAAGTTCATCGAGGACAAACACAAGTCACTGCTGCCCCCGAATTTCAGGACACGGCTTTCTGTTCAACTCAAGAAGTTTGTCAAGTCGGAGAGGCTGTTCAAGGTGAAGAATTCCTTCAAGATCTCCTCCACGGAGAAAACCAGGACTGCCAAACCACGCAAGAAGGGCGCGACGCCTGAGCAGAAGGCTGCCAAGAAGATCGCAGAGCAGGGGCTGAAGACCAAGAGGCTGAGTCACGTGAAGACGCCAGAGGCTCTCAAGAAGGCCCGCAAGGATACTGCGAAGTCGATAGCCTCGTCGGCTGGGAATGACCGGAAAGTGAAGCGTCTGAGTCAGGTTAAGACTCCCGACGCAATGAAGAAGAAGACCAAAATTACCCCTGTGAAGAGGAAGACTACTTCCATACCCATTAAGTCTTCTAGGCCTGCGAAGAAGGCTAGGAAATAG 573 0.5131 MAKANAKEKSTSAALHPPYFHMISDAISTLNDRTGSSQQAISKFIEDKHKSLLPPNFRTRLSVQLKKFVKSERLFKVKNSFKISSTEKTRTAKPRKKGATPEQKAAKKIAEQGLKTKRLSHVKTPEALKKARKDTAKSIASSAGNDRKVKRLSQVKTPDAMKKKTKITPVKRKTTSIPIKSSRPAKKARK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00021 190 SUPERFAMILY "Winged helix" DNA-binding domain 15 97 IPR036390 -
Pral5106g00021 190 MobiDBLite consensus disorder prediction 88 105 - -
Pral5106g00021 190 CDD H15 13 97 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00021 190 SMART h15plus2 13 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00021 190 MobiDBLite consensus disorder prediction 126 190 - -
Pral5106g00021 190 MobiDBLite consensus disorder prediction 84 105 - -
Pral5106g00021 190 PANTHER HISTONE H1 7 173 - -
Pral5106g00021 190 Gene3D - 10 109 IPR036388 -
Pral5106g00021 190 Pfam linker histone H1 and H5 family 16 83 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00021 190 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 15 85 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00021 190 MobiDBLite consensus disorder prediction 149 165 - -
Pral5106g00021 190 PRINTS Histone H5 signature 2 23 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pral5106g00021 190 PRINTS Histone H5 signature 162 181 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pral5106g00021 190 PRINTS Histone H5 signature 29 46 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00021 Pral-Chr5106 122553 123532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00021 17 97 Single Myb Histone (SMH) Gene Family AT1G72740 37.037 8.79e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00021 K11275 - zju:107426309 200.675