Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00019 ATGATGATGTTACTTTCCATCGTCTGCCCTCATCCTCCAAACATGGCCAAAGCAAATGCTAAGGAAAAATCCACTTCCGCTGCTCTCCATCCCCCCTATTTCCATATGATATCGGACGCCATTTCTACGCTGAACGATCGCACGGGTTCCAGTCAGCAAGCAATTTCCAAGTTCATCGAGGACAAACACAAGTCACTGCTGCCCCCGAATTTCAGGACACGGCTTTCTGTTCAACTCAAGAAGTTTGTCAAGTCGGAGAGGCTGTTCAAGGTGAAGAATTCCTTCAAGATCTCCTCCACGGAGAAAACCAGGACTGCCAAACCACGCAAGAAGGGCGCGACGCCTGAGCAGAAGGCTGCCAAGAAGATCGCAGAGCAGGGGCTGAAGACCAAGAGGCTGAGTCACGTGAAGACGCCAGAGGCTCTCAAGAAGGCCCGCAAGGATACTGCGAAGTCGATAGCCTCGTCGGCTGGGAATGACCGGAAAGTGAAGCGTCTGAGTCAGGTTAAGACTCCCGACGCAATGAAGAAGAAGACCAAAATTACCCCTGTGAAGAGGAAGACTACTTCCATACCCATTAAGTCTTCTAGGCCTGCGAAGAAGGCTAGGAAATAG 615 0.5089 MMMLLSIVCPHPPNMAKANAKEKSTSAALHPPYFHMISDAISTLNDRTGSSQQAISKFIEDKHKSLLPPNFRTRLSVQLKKFVKSERLFKVKNSFKISSTEKTRTAKPRKKGATPEQKAAKKIAEQGLKTKRLSHVKTPEALKKARKDTAKSIASSAGNDRKVKRLSQVKTPDAMKKKTKITPVKRKTTSIPIKSSRPAKKARK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00019 204 PRINTS Histone H5 signature 176 195 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pral5106g00019 204 PRINTS Histone H5 signature 43 60 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pral5106g00019 204 PRINTS Histone H5 signature 16 37 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pral5106g00019 204 SUPERFAMILY "Winged helix" DNA-binding domain 29 111 IPR036390 -
Pral5106g00019 204 CDD H15 27 111 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00019 204 MobiDBLite consensus disorder prediction 140 204 - -
Pral5106g00019 204 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 29 99 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00019 204 SMART h15plus2 27 94 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00019 204 Gene3D - 24 120 IPR036388 -
Pral5106g00019 204 PANTHER HISTONE H1 12 187 - -
Pral5106g00019 204 Pfam linker histone H1 and H5 family 30 97 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral5106g00019 204 MobiDBLite consensus disorder prediction 163 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00019 Pral-Chr5106 103583 123532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00019 31 111 Single Myb Histone (SMH) Gene Family AT1G72740 37.037 1.61e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00019 K11275 - zju:107426309 200.675