Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5104g00022 ATGACACAACCGTTTCAGGAAATCGTGGGGCTTAAGAATCAGGAAGGGGCAAGTTCAGAACTTGTCAATGAGGGCAACAATAAGCAGGTGCCACAATCTTCTTTAGCATACTTGGAGCTGCTGAGTAATTACGCAGGCAGGTTCAAGAAGTTAAGGGTCCAAGACATAACCGACTCGAACAATAGTGAAGCTCATGCAGGTCACCAGGATTTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTACGTACAATTTTCTACTCATTGGTGTGATGATTATTGCATGCCTCTGCACCCATATGCCTCTGGTCTCGAGGATCTGTCTGAAAAAGAAAATAGAGATGTTGAACTTGCACAGTTTCTTCTTGCTGCGGCCGAGAGGGTTAGTTGCCAACAGCTTGAACGTGCAAGCAGGATGCTTCTTCATTGCTTATTTAATTCATCTCCTGGCGGAAATGCTATGCAGAGAGTTATCTTTCATTTCGCTCAAGCACTTCGAGAGAGAATTGAAAAAGAAGCAGGGGGCACCATTTTGATGGGTTGTCCAAAGAACATAGAAAACGAGTTAATTCAAAACTTGGATACCAACATAGCCCTTGCTTGTCATCAGAAAATTCCTTTCAACCAAGTGATGCAATTCGCTGGTGTACAAGCTATGGTGGAGCACGTTGCACATGATACAAAAATCCATGTTATAGATCTTGATATCAGGCGTGGAATTCAGTGGACGTGTTTGATGCAGGCACTCGTAGGGAGGAACGAAAGCAGAGTGGAGCTCTTGAAGATAACTGCTATAGGAATTGTTGGCCAGCCCACTGTAGAAGAAACTGGCAAAAGATTGACGAGTTTCGCTAGATCGTTGAACTTGCCATTCGCATATAAGCAAGTTTATGTTACAGACATGATCGAAATTACAGAACAACATTTTGAAATTGAAGATGATGAAGCCGTGGCTGTCTACGCTCTGTATGTACTTAGGACTATGGTATCAAGGCCAGCTTGCTTGGAAAACCTGATGAGTGTAATAAGAAATATCAAACCAATTATAATGGTAGTTCTTGAAGTGGAAGCCAATCATAATTCATCCTCATTCGCAATTCGCTTCATTGAAGCATTGTTCCACTACTCGGCATTTTTTGATTGCCTCGAGACCTGCTTAAAAGGTGAAAATAGGGGCAGAATGGCAACGGAAGCAATATTATCTGAAGGGATACGAAACATTGTTGCTGCGGAAGGAGGAGAAAGAACAGTGAGGAATGTGAAGATAGAAGTGTGGAGGAGGTTCTTTGCAAGGTACAGAATGGTGGAAATTGGATTTAGCGAGTCATCTCTGTACCAAGCTAGCTTGGTGGCCAGAGAATTCGCCAGCGGCAAATTTTGCACTCTGGACACAAATGGAAAATGTCTTACGGTTGGGTGGAAGGGGACCCCATTGCATACCGTTTCAGCTTGGAGGTTCCTTTGA 1470 0.434 MTQPFQEIVGLKNQEGASSELVNEGNNKQVPQSSLAYLELLSNYAGRFKKLRVQDITDSNNSEAHAGHQDLSAEEIIRVAGARYVQFSTHWCDDYCMPLHPYASGLEDLSEKENRDVELAQFLLAAAERVSCQQLERASRMLLHCLFNSSPGGNAMQRVIFHFAQALRERIEKEAGGTILMGCPKNIENELIQNLDTNIALACHQKIPFNQVMQFAGVQAMVEHVAHDTKIHVIDLDIRRGIQWTCLMQALVGRNESRVELLKITAIGIVGQPTVEETGKRLTSFARSLNLPFAYKQVYVTDMIEITEQHFEIEDDEAVAVYALYVLRTMVSRPACLENLMSVIRNIKPIIMVVLEVEANHNSSSFAIRFIEALFHYSAFFDCLETCLKGENRGRMATEAILSEGIRNIVAAEGGERTVRNVKIEVWRRFFARYRMVEIGFSESSLYQASLVAREFASGKFCTLDTNGKCLTVGWKGTPLHTVSAWRFL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5104g00022 489 ProSiteProfiles GRAS family profile. 110 487 IPR005202 -
Pral5104g00022 489 Pfam GRAS domain family 120 487 IPR005202 -
Pral5104g00022 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 98 480 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5104g00022 Pral-Chr5104 91543 93012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5104g00022 109 488 GRAS Transcription Factor Family AT2G01570 29.457 1.68e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5104g00022 GRAS 2e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5104g00022 - - gmx:100791952 620.542