Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5104g00018 ATGGATGGTACTGCATCCCCAAAACTTGAGTCAGAAGCATCTCCAGAGGTCAATGCAAAAGAAGCTCAACCGCTCAAAAAAACGGTGCTTCAGAAAACTGTTATGAGGGTGAGAGTTGGAGAAAACGCAAGAAAGCTTAAGAACGAAGGGCTGGCTTCCGATTCATGGTCTTGGAGAAAATATGGACAGAAGCCTATAAAAGGATCTCCTTACCCAAGGGGCTACTACAGGTGCAGCACATCCAAGGGTTGTTCAGCCAGAAAGCAAGTAGAGAGATGCAGAACTGATGCTTCAATGCTCATCGTTACCTATACGTCTACTCATAACCATCCACCTCCTGATCGTCCCTCCAACTCCAATCTAAATCTACCACAAAACTCCCAAAACCAGACCGTTGAAGATCTTCCAGCGACTTTGAAAGTGGAAGACCAAGAAGAGAAAGAAAGGGAAAAAGATCACAAGCCCACGACGGTCAGCTATGAATGTGTGAAAGAAGAAAATTTCTATTACTTGCAATCGCCAATTCAGAGCTCTGAAGACATCATTGTTGACCCAGAAGATCCTTTCCAACTGAACCCAGAGAAAATACATGGTAGAATAGATCTCCTCCCAGAAAAAGAGCTCCCCAGTTATTCTCAGTTCAAGAACTCGTCGACACCCAAATCCGAAGAGCATGACTTTTTCGATGAACTTGAAGAGCTCCCCATATCTTCACCTTTCTTAAACTTAATGAGGCGCAATTTCTCCGAGGAAAGGATTGTGGTTGCCCCTTCATGA 777 0.4427 MDGTASPKLESEASPEVNAKEAQPLKKTVLQKTVMRVRVGENARKLKNEGLASDSWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSARKQVERCRTDASMLIVTYTSTHNHPPPDRPSNSNLNLPQNSQNQTVEDLPATLKVEDQEEKEREKDHKPTTVSYECVKEENFYYLQSPIQSSEDIIVDPEDPFQLNPEKIHGRIDLLPEKELPSYSQFKNSSTPKSEEHDFFDELEELPISSPFLNLMRRNFSEERIVVAPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5104g00018 258 Gene3D WRKY domain 39 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5104g00018 258 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00018 258 FunFam WRKY transcription factor 65 35 113 - -
Pral5104g00018 258 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00018 258 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00018 258 SUPERFAMILY WRKY DNA-binding domain 49 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5104g00018 258 MobiDBLite consensus disorder prediction 105 135 - -
Pral5104g00018 258 MobiDBLite consensus disorder prediction 105 156 - -
Pral5104g00018 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 239 IPR044810 GO:0003700
Pral5104g00018 258 MobiDBLite consensus disorder prediction 138 156 - -
Pral5104g00018 258 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5104g00018 Pral-Chr5104 83934 85070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5104g00018 46 240 WRKY Transcription Factor Family AT4G01250 41.538 6.57e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5104g00018 WRKY 8.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5104g00018 - - gmx:100127368 291.582