Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5104g00017 ATGGTACTGCATCCCCAAAACTTGAGTCAGAAGCATCTCCAGAGGTCAATGCAAAAGAAGCTCAACCGCTCAAAAAAACGGAAAACTGCAGTTCAGAAAACTGTTATGAGGGTGAGAGTTGGAGAAAACGCAAGAAAGCTTAAGAACGAAGGGCTGGCTTCCGATTCATGGTCTTGGAGAAAATATGGACAGAAGCCTATAAAAGGATCTCCTTACCCAAGGGGCTACTACAGGTGCAGCACATCCAAGGGTTGTTCAGCCAGAAAGCAAGTAGAGAGATGCAGAACTGATGCTTCAATGCTCATCGTTACCTATACGTCTACTCATAACCATCCACCTCCTGATCGTCCCTCCAACTCCAATCTAAATCTACCACAAAACTCCCAAAACCAGACCGTTGAAGATCTTCCAGCGACTTTGAAAGTGGAAGACCAAGAAGAGAAAGAAAGGGAAAAAGATCACAAGCCCACGACGGTCAGCTATGAATGTGTGAAAGAAGAAAATTTCTATTACTTGCAATCGCCAATTCAGAGCTCTGAAGACATCATTGTTGACCCAGAAGATCCTTTCCAACTGAACCCAGAGAAAATACATGGTAGAATAGATCTCCTCCCAGAAAAAGAGCTCCCCAGTTATTCTCAGTTCAAGAACTCGTCGACACCCAAATCCGAAGAGCATGACTTTTTCGATGAACTTGAAGAGCTCCCCATATCTTCACCTTTCTTAAACTTAATGAGGCGCAATTTCTCCGAGGAAAGGATTGTGGTTGCCCCTTCATGA 780 0.441 MVLHPQNLSQKHLQRSMQKKLNRSKKRKTAVQKTVMRVRVGENARKLKNEGLASDSWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSARKQVERCRTDASMLIVTYTSTHNHPPPDRPSNSNLNLPQNSQNQTVEDLPATLKVEDQEEKEREKDHKPTTVSYECVKEENFYYLQSPIQSSEDIIVDPEDPFQLNPEKIHGRIDLLPEKELPSYSQFKNSSTPKSEEHDFFDELEELPISSPFLNLMRRNFSEERIVVAPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5104g00017 259 MobiDBLite consensus disorder prediction 1 15 - -
Pral5104g00017 259 SUPERFAMILY WRKY DNA-binding domain 50 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5104g00017 259 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00017 259 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00017 259 MobiDBLite consensus disorder prediction 106 157 - -
Pral5104g00017 259 MobiDBLite consensus disorder prediction 139 157 - -
Pral5104g00017 259 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 240 IPR044810 GO:0003700
Pral5104g00017 259 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00017 259 MobiDBLite consensus disorder prediction 16 30 - -
Pral5104g00017 259 MobiDBLite consensus disorder prediction 1 30 - -
Pral5104g00017 259 MobiDBLite consensus disorder prediction 106 136 - -
Pral5104g00017 259 FunFam WRKY transcription factor 65 33 114 - -
Pral5104g00017 259 Gene3D WRKY domain 41 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5104g00017 Pral-Chr5104 83934 85128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5104g00017 22 241 WRKY Transcription Factor Family AT4G01250 39.545 3.19e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5104g00017 WRKY 8.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5104g00017 - - gmx:100127368 287.345