Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5104g00010 ATGGGAGTTTCTTCACAGCCTTCGCTTGCTCCCTTTTCTTTCAAAGACTTGGTGAAGAAGGGGGCTCAAGTTGAAACCCAGAAAAGCGTTAAGAGCAGAAGGCGAGGAAGGATTCTAATGAAGAGGAGGGCTCGCTTAATGGAAGGTTCTAGAAGAGGAGCCAACAAGATGGAGAGGAGGATGACGAAGTTGAAGAGGCTCATACCCGACGGCGAGCGCATGGGGTTGGATGGACTCTTCAGAAAGACGGCCGATTACATTTTGGCTTTGCAAATGAGAGTGAGGGTCATGCAGATTATGGTTAAGGTAGTGACGGCTTCTGATCAGTGA 330 0.4879 MGVSSQPSLAPFSFKDLVKKGAQVETQKSVKSRRRGRILMKRRARLMEGSRRGANKMERRMTKLKRLIPDGERMGLDGLFRKTADYILALQMRVRVMQIMVKVVTASDQ 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5104g00010 109 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 41 90 IPR011598 GO:0046983
Pral5104g00010 109 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 19 104 IPR044660 GO:0006355
Pral5104g00010 109 CDD bHLH_AtIBH1_like 48 101 IPR044549 GO:0006355
Pral5104g00010 109 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 102 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5104g00010 Pral-Chr5104 50425 50941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5104g00010 39 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 50.704 5.67e-18 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5104g00010 - - palz:118046886 106.686