Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5104g00009 ATGAAGAAGGAGACGGGCGTGACAACGGAAGATGTGACTGGATCCTCTTCATTGTCGGGTGACAATGGTTATCCTCTATCGAATGCTTTTGAGTTTTCTGAAGGGGAAAAGAGCTCTCTTGGGTTTATGGAGTTGCTGGGTCTCCAAGACTGCAGTCCTCTGCTTCATTTGCCGGCGCAGCAGCAAGCATCAACTCTTGATCCCTCTGCTCTGAAAGATCTATCTGATACAGTCAAAGAGTGTTCCGAGGTCTCCAATCAACAACCTGCGACCCCCAACTCTTCATCGATCTCGTCGGCGTCCAGTGGCGCCATGACTGTCAATGACGAACACAATAGAACTTCAGACCAAGCCGAAGAACGCTCCAAGACCAAGAAACTATTGAAAGCCAAGAAGACAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATTTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGCGCTTCATGTAATGTGAAGAAACGAGTGGAGCGATCTTTCAGCGATCCAAGCATTGTAGTAACAACTTATGAAGGTCAGCACACCCATCCAAGCCCAGTTATGCCTCGCTCAAACCTCGCCGGAATGGATGCTTCACTACCGGCGGGTGTCTCCGCTGGTTGTGCCGCCTCCTTCGGTTTCCCGATGCAAGGAAACCTGTTATCCCAGTATCATCATCCTCAGCAACGACAAGTTCTTCACAATAATAATACAATATCATCCACGGGCTTTCCTAACAATAGCAATACTGATTCAACTTCAAAGAAAGCTGCATTTGCTTTTGCTCAAGACATAAGATTTTGTAATTCTGGAGCCACTGCAGCTTTTCTAAGAGACCACGGGCTTCTTCAAGATATTGTTCCTTCACACATGTTGAAAGAAGAATAG 972 0.4681 MKKETGVTTEDVTGSSSLSGDNGYPLSNAFEFSEGEKSSLGFMELLGLQDCSPLLHLPAQQQASTLDPSALKDLSDTVKECSEVSNQQPATPNSSSISSASSGAMTVNDEHNRTSDQAEERSKTKKLLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFSDPSIVVTTYEGQHTHPSPVMPRSNLAGMDASLPAGVSAGCAASFGFPMQGNLLSQYHHPQQRQVLHNNNTISSTGFPNNSNTDSTSKKAAFAFAQDIRFCNSGATAAFLRDHGLLQDIVPSHMLKEE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5104g00009 323 MobiDBLite consensus disorder prediction 78 139 - -
Pral5104g00009 323 MobiDBLite consensus disorder prediction 8 26 - -
Pral5104g00009 323 MobiDBLite consensus disorder prediction 1 29 - -
Pral5104g00009 323 Gene3D WRKY domain 138 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5104g00009 323 PIRSF WRKY_txn_fact_IIc 1 323 IPR017396 GO:0003700
Pral5104g00009 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 262 IPR044810 GO:0003700
Pral5104g00009 323 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00009 323 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00009 323 FunFam WRKY transcription factor 57 140 214 - -
Pral5104g00009 323 MobiDBLite consensus disorder prediction 80 111 - -
Pral5104g00009 323 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5104g00009 323 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5104g00009 323 MobiDBLite consensus disorder prediction 112 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5104g00009 Pral-Chr5104 44175 46006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5104g00009 31 323 WRKY Transcription Factor Family AT2G47260 49.383 2.80e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5104g00009 WRKY 9.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5104g00009 - - aprc:113872234 380.563