Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5103g00017 ATGACAAGAAGTGTGTCCAATTGTGGCTCATCCGCTCCGTGCGGTAATGAAGCAGAGACAGTAGAAATAAAGAAAGGTGCATGGACAGAGGAAGAGGACTCTATTCTGAGCAACTACATCACCCTTTACGGCGAAGGCCGATGGAGCTCTGTTGCTCGCTATCTTAAGCGAACGGGCAAAAGCTGCAGACTAAGATGGTTAAACTACTTGAGTCCAAAGGTTCGACGCGGCAATATCACACTCCAAGAACAGTTCTTGATTATCGACCTCCATTTCCGCTGGGGCAATCGGTGGTCGAAAATCGCGCAGCACTTGCCAGGCAGAACAGACAATGAGATAAAAAACTATTGGAGGACGAGAGTGGTGAGACAGGCTAAACGATTGAAATGCGACGAGAATAGCAAACAATTTAGAGACGCCTTGCGTTTCCTATGGATGCCTCGCCTCCTGGAGAGGATCCGGGCCTCCTCATCCTCATCCGGACCTGGCCCTGTGCATGCCCAAGCTCATAGCGACCACTGTCTCACGGCGCTGCCATCGGCGCACTCCGAACTACTTCATGCGCAAGTTCCTCCTCTCTCCGGGTCCAACCTGTTTTGCAGGTTTACGGAAAAAGGACAAGTGGAATCGTCGGAGATGCAAGCGCTTGAGGCGACCGGTGGTTTTGGAGTTGCCGACTCTTGGACGGATGAAAACACCTGGTTCTTGCAACAGCAGCTGTCCGGTGAGATATTGATTAATCCGACCCATGGTTGA 756 0.5132 MTRSVSNCGSSAPCGNEAETVEIKKGAWTEEEDSILSNYITLYGEGRWSSVARYLKRTGKSCRLRWLNYLSPKVRRGNITLQEQFLIIDLHFRWGNRWSKIAQHLPGRTDNEIKNYWRTRVVRQAKRLKCDENSKQFRDALRFLWMPRLLERIRASSSSSGPGPVHAQAHSDHCLTALPSAHSELLHAQVPPLSGSNLFCRFTEKGQVESSEMQALEATGGFGVADSWTDENTWFLQQQLSGEILINPTHG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5103g00017 251 SMART sant 24 72 IPR001005 -
Pral5103g00017 251 SMART sant 75 123 IPR001005 -
Pral5103g00017 251 FunFam MYB transcription factor 80 143 - -
Pral5103g00017 251 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pral5103g00017 251 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 184 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral5103g00017 251 Gene3D - 22 76 - -
Pral5103g00017 251 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Pral5103g00017 251 Pfam Myb-like DNA-binding domain 25 70 IPR001005 -
Pral5103g00017 251 CDD SANT 27 70 IPR001005 -
Pral5103g00017 251 Gene3D - 79 140 - -
Pral5103g00017 251 CDD SANT 80 119 IPR001005 -
Pral5103g00017 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Pral5103g00017 251 FunFam Transcriptional activator Myb isoform A 23 76 - -
Pral5103g00017 251 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Pral5103g00017 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Pral5103g00017 251 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5103g00017 Pral-Chr5103 67235 68253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5103g00017 19 240 MYB Transcription Factor Family AT2G47190 46.614 2.13e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5103g00017 Myb_DNA-binding 2.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5103g00017 K09422 - gmx:100819467 280.796