Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5103g00006 ATGGAAGACGAGCATATAATGATAGATGATCTGTCTTCTCACCTGGGATCACTTTATAAGTTCCCTAAACCCAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGATCTGAAGCTGCCGCTTATATTCGTAAAAATGTGATAAGATTTATTTTCGAGGACGCCAGCTTCCCACAGTCATCTGAAGTTGATAATGTTTTCCTACAAGAATTAGAGAACTCCCTTAGGAAGGCATTTCTTTTGGCCGACTCTGCTTTAGCTGATGATTGTAGTGTGAGCAGTTCGTCAGGGACCACAGCGCTCACAGCTTTAATATTTGGAAGGCTGTTGATGGTGACCAATGCTGGTGATTGTCGAGCAGTTCTTTGCCGTAAAGGGGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCATCGGAACGGAGGCGCGTTGAGGAATCAGGTGGTTTCGTTGATGATGGTTATCTTAATGGGGTGTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAGCTCCCACGGGGTTCTCCTTCACCTCTGATTGCAGAGCCAGAGTTTAGGCAAGTGGTTCTAACAGAGGACGACGAATTCCTCATCATAGGATGCGATGGAATTTGGGATGTTATGTCAAGTCAGCATGCAGTGAGTGTTGTCAGGAGAAGCCTGAGGCGCCACGATGATCCGGGGAAGGGCGCCAGAGACCTGGTCATGGAAGCTTTGCTGCTGAATGCGTTTGACAATCTCACAGTAATTGTTGTGTGCTTCACATCCCCTGATCACAGGGAACTATCACCCGCCCACAGGTTGAGACATTGTAGCCTTTCTACAGAAGCACTTGGTAGCTTGAGGAGCTTGTTGGAAGGAAGTGCTAGCAACTGA 888 0.4718 MEDEHIMIDDLSSHLGSLYKFPKPSAFYGVFDGHGGSEAAAYIRKNVIRFIFEDASFPQSSEVDNVFLQELENSLRKAFLLADSALADDCSVSSSSGTTALTALIFGRLLMVTNAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGFVDDGYLNGVLSVTRALGDWDMKLPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSVVRRSLRRHDDPGKGARDLVMEALLLNAFDNLTVIVVCFTSPDHRELSPAHRLRHCSLSTEALGSLRSLLEGSASN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5103g00006 295 PANTHER PROTEIN PHOSPHATASE 2C 1 256 IPR015655 GO:0004722|GO:0006470
Pral5103g00006 295 SMART PP2C_4 4 256 IPR001932 -
Pral5103g00006 295 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
Pral5103g00006 295 FunFam Probable protein phosphatase 2C 22 1 261 - -
Pral5103g00006 295 CDD PP2Cc 1 258 IPR001932 -
Pral5103g00006 295 Gene3D - 1 265 IPR036457 -
Pral5103g00006 295 ProSiteProfiles PPM-type phosphatase domain profile. 1 258 IPR001932 -
Pral5103g00006 295 Pfam Protein phosphatase 2C 1 250 IPR001932 -
Pral5103g00006 295 SUPERFAMILY PP2C-like 1 259 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5103g00006 Pral-Chr5103 5225 7513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5103g00006 1 291 PP2C-type Phosphatase Gene Family AT3G62260 70.068 6.48e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5103g00006 K14803 - gmx:100819791 474.937