Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5103g00005 ATGGTGGCTGAAGCAGACGTTGTTTATCAACAGAGCCTGCCTCTGTTGGATGTACAGTATATTCCCAAAGCAAGCAGTATTCATGAGATCGAAGAGCCACCCTTCGTCTCGCCATCATCCGGCCCTTCTGGTCCTGACAAACTTCGCGCATATGACGCAGTCTCTGCCCATTTACTGAATTCACAACAAGACGTTTTAGCTGCAAAACAAGTCCCCCGTGCTTCTCTTGATTCTGCTGTTGTGCAGTTTGTGCCCACCATCCGTTCTGGTAGTTATGCTGACATTGGGCCGCGTAGATACATGGAAGACGAGCATATAATGATAGATGATCTGTCTTCTCACCTGGGATCACTTTATAAGTTCCCTAAACCCAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGATCTGAAGCTGCCGCTTATATTCGTAAAAATGTGATAAGATTTATTTTCGAGGACGCCAGCTTCCCACAGTCATCTGAAGTTGATAATGTTTTCCTACAAGAATTAGAGAACTCCCTTAGGAAGGCATTTCTTTTGGCCGACTCTGCTTTAGCTGATGATTGTAGTGTGAGCAGTTCGTCAGGGACCACAGCGCTCACAGCTTTAATATTTGGAAGGCTGTTGATGGTGACCAATGCTGGTGATTGTCGAGCAGTTCTTTGCCGTAAAGGGGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCATCGGAACGGAGGCGCGTTGAGGAATCAGGTGGTTTCGTTGATGATGGTTATCTTAATGGGGTGTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAGCTCCCACGGGGTTCTCCTTCACCTCTGATTGCAGAGCCAGAGTTTAGGCAAGTGGTTCTAACAGAGGACGACGAATTCCTCATCATAGGATGCGATGGAATTTGGGATGTTATGTCAAGTCAGCATGCAGTGAGTGTTGTCAGGAGAAGCCTGAGGCGCCACGATGATCCGGGGAAGGGCGCCAGAGACCTGGTCATGGAAGCTTTGCTGCTGAATGCGTTTGACAATCTCACAGTAATTGTTGTGTGCTTCACATCCCCTGATCACAGGGAACTATCACCCGCCCACAGGTTGAGACATTGTAGCCTTTCTACAGAAGCACTTGGTAGCTTGAGGAGCTTGTTGGAAGGAAGTGCTAGCAACTGA 1188 0.4773 MVAEADVVYQQSLPLLDVQYIPKASSIHEIEEPPFVSPSSGPSGPDKLRAYDAVSAHLLNSQQDVLAAKQVPRASLDSAVVQFVPTIRSGSYADIGPRRYMEDEHIMIDDLSSHLGSLYKFPKPSAFYGVFDGHGGSEAAAYIRKNVIRFIFEDASFPQSSEVDNVFLQELENSLRKAFLLADSALADDCSVSSSSGTTALTALIFGRLLMVTNAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGFVDDGYLNGVLSVTRALGDWDMKLPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSVVRRSLRRHDDPGKGARDLVMEALLLNAFDNLTVIVVCFTSPDHRELSPAHRLRHCSLSTEALGSLRSLLEGSASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5103g00005 395 Pfam Protein phosphatase 2C 98 350 IPR001932 -
Pral5103g00005 395 SUPERFAMILY PP2C-like 82 359 IPR036457 -
Pral5103g00005 395 PANTHER PROTEIN PHOSPHATASE 2C 76 356 IPR015655 GO:0004722|GO:0006470
Pral5103g00005 395 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Pral5103g00005 395 FunFam Probable protein phosphatase 2C 22 73 361 - -
Pral5103g00005 395 SMART PP2C_4 78 356 IPR001932 -
Pral5103g00005 395 Gene3D - 74 365 IPR036457 -
Pral5103g00005 395 ProSiteProfiles PPM-type phosphatase domain profile. 88 358 IPR001932 -
Pral5103g00005 395 CDD PP2Cc 87 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5103g00005 Pral-Chr5103 5225 7855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5103g00005 101 391 PP2C-type Phosphatase Gene Family AT3G62260 70.068 4.22e-150 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pral5103g00005 PP2C 6.4e-65 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5103g00005 K14803 - gmx:100819791 568.54