Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5102g00001 ATGGATGACTGCTGTGCTGTTTGCGCCGAACCTTTGGAATGGGTTGCGTACGGTCCCTGTTTGCATCGGGAGGTTTGCTCGACCTGCGTAGCTCGTCTCCGTTTTATATGCGACGATCGCCGTTGTTGCATCTGCAAGACCCAATGCGACTGTGTTTTTGTCACAAAGGCTCTAGGAGATTTTACAAGGATGATTAATAACTTCTCAGTGCTGCCATCAGATGCAAGGGAGGGTAAGGTGGGTTCATACTGGTACCATGAAGATACAAATGCTTTTTTTGATGATGTGGACCACTACAAGATGATCAAGGCCATGTGCAAGCTTTCATGTAGTGTATGTGACAACATGGAGGAGCAAGCACCTGATGCCTCAAAGCGTCGAGCAAGGTTTAGGAATATAGAACAGCTAAAGGGTCACTTGTTCCGCTATCACAGGTTGCTCATGTGCAGTCTATGTTTGGAAGGAAGGAAGGTATTCATTTGTGAACAAAAACTATACACTAGAGCACAGTTAAATCAGCATATAAGCACTGGTGATTCTGAGGTGGATGGAAGCGAGAGCGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCCGAACCCCATTTTATGGGGACAATGAACTATACACTCATATGTCGACAGAACATTTTACTTGTCACATATGCCAAAGGCAACATCCAGGACAATATGAATATTATAAGAATTATGATGACTTAGAGACCCACTTCCGTCAAGAGCACTTCCTATGTGAAGATGAAGCTTGCCTTGCTAAAAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACATGGAGGGCGAATGTCAAGGTCAAAACGCAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACACAGTAATCAACAAGATCAACGGCGTGGAAGAGGTCGGACATTTCGTCGTGATCCTTCTGAAAGTGAACTTTCTTTGGCCATTCAAGCCAGTTTTGAGACAGCAAGTGCAGAGAGCACAAGTCATGATCTAGCTACATCAAGCAGTGGACAAGTTGCTCTTGGTTATGGGGACTTTGATAATGAGCCAGGCATTCAATCATCTGAATCCTTAGCTACATCAAGTTCTGAATTGCCTTCAAGATACCTCCAAGCCTTGGGACAAAATTCAAGGAGTTCACCATTGGAAGATTCCTCCTTCCCTCCACTTCCCATAGCATCAATCAATGGCCAAGCAAAGCCCAAAAATGAATCTGAAGGTTCATCTAGCAATACTATGGCAGCACATTTGCGTCGACACAGCAACAGAAATGTATCTGCTCTTAACCCTGCTAATGGATGGCCAGTTGCGAGTCGTGGATCTGTGCAGTCATCAAGTAATCCTATGCAATCTAAAAAGTCAACAAATGTTGCTTCTGGAGTGTCAGGTAATTCCAGTCAGACAAAGACTGTCATTAATCGTGGGCTGGCACCTTCAACCTATGCTAGTTCTGTCGAGACTACACAGAGAACTGCTCATGGACATTTGTCTCCTGGCATGTCAAGGGAAATACGTGACAATGGTAGAATTGTTCATTCTGTTTCTGCTCCAAATCTCATCGAAAGTAGTCCTTTGCAGTCGGAACCCTCATTTTCTGATTTTCCTCCAGTATCTGCTACAAAAGTCAACAAGCTGCCTGCAACTAGCCAGTCTTCGACGATGACAAGTGCGGAGGGTGTTGATTCTGCTGCTAATAAGTCCTTGGTTGAAAAGATTCGTAGTGCTCTTGATTTTGATCAAGATAGATACGCCATTTTTAAAGACATCTCTGCTCAGTATCGCCATGGAATAATAGATACAGGAACATATTTGGATTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACTTGAGTTAGCTAGGCTGTGCCCCGATCCACAGAAGCGGAAAGAACTTGTTGATTCTTACAATGCGAGTTTGCAAAGAATTGCTTTTCAAGAAAATGATTGGGGTGGCAGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAGGGAAAGGTAAAGGTAAAGGTAAAGGGAAGTCTATAGATGTTGAAGAGAGACACTTTAAGGATAATTTAGAAGATAGCTTTATAAGCACTGTACGTCAATTACAGTTGAACCATAAACCTTCGGAAGAGAATGCAGAGGTCCTATCAAAGGGTGATTACCGTAGTGCCAGAGGTAAGTCGAAAATTTTGGCTGATGAACAACTGATTGGTACAAATTCTCGTAGTGTAGCCAACCCAAAGCATGCTGAGCAGAGTGAAGCATCACTTGGCAAGATTCCTAACCAAAGGAAAGATGAGGGGGCTGGTGGGAGCAGGCAACGCAAAAAAGCTTCCAAGTTCATTAGAATGCGCCTCGGTGATGGTTCTGTAGAAGCATTGTTGGATCTTAGGAGTTCAAATGCCGGCTCAGATCCTGGATCAACAGAGGCCTTGGATGGTAATAAAAGCGATCCTGGGGGGCTGCCTGTGCGAGGTGTCTGGCGGAATGGAGGAGGTCATAAACTCTTTTCCTAG 2553 0.4407 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTQCDCVFVTKALGDFTRMINNFSVLPSDAREGKVGSYWYHEDTNAFFDDVDHYKMIKAMCKLSCSVCDNMEEQAPDASKRRARFRNIEQLKGHLFRYHRLLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGQYEYYKNYDDLETHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHSNQQDQRRGRGRTFRRDPSESELSLAIQASFETASAESTSHDLATSSSGQVALGYGDFDNEPGIQSSESLATSSSELPSRYLQALGQNSRSSPLEDSSFPPLPIASINGQAKPKNESEGSSSNTMAAHLRRHSNRNVSALNPANGWPVASRGSVQSSSNPMQSKKSTNVASGVSGNSSQTKTVINRGLAPSTYASSVETTQRTAHGHLSPGMSREIRDNGRIVHSVSAPNLIESSPLQSEPSFSDFPPVSATKVNKLPATSQSSTMTSAEGVDSAANKSLVEKIRSALDFDQDRYAIFKDISAQYRHGIIDTGTYLDYVQQFGLSHLVLELARLCPDPQKRKELVDSYNASLQRIAFQENDWGGSSIHHKDGKVSKKGKGKGKGKGKSIDVEERHFKDNLEDSFISTVRQLQLNHKPSEENAEVLSKGDYRSARGKSKILADEQLIGTNSRSVANPKHAEQSEASLGKIPNQRKDEGAGGSRQRKKASKFIRMRLGDGSVEALLDLRSSNAGSDPGSTEALDGNKSDPGGLPVRGVWRNGGGHKLFS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5102g00001 850 MobiDBLite consensus disorder prediction 809 850 - -
Pral5102g00001 850 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 669 695 - -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 744 796 - -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 746 762 - -
Pral5102g00001 850 PANTHER ZINC FINGER PROTEIN 598 1 756 IPR044288 GO:0061630|GO:0072344
Pral5102g00001 850 MobiDBLite consensus disorder prediction 365 399 - -
Pral5102g00001 850 SMART c2h2final6 108 144 IPR013087 -
Pral5102g00001 850 SMART c2h2final6 220 250 IPR013087 -
Pral5102g00001 850 SMART c2h2final6 251 280 IPR013087 -
Pral5102g00001 850 SMART c2h2final6 196 219 IPR013087 -
Pral5102g00001 850 CDD RING-HC_ZNF598 3 54 IPR041888 -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 304 322 - -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 357 518 - -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 300 325 - -
Pral5102g00001 850 MobiDBLite consensus disorder prediction 413 510 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5102g00001 1 850 C2H2 Transcription Factor Family AT3G62240 52.239 0.0 816