Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5099g00009 ATGGAAAACCAACGACGCCGCCGTGAATTGAGCTCCATTAGCTCCGGCGACTTTCTCCGGCAGAATTTAGATCCAATGAGCACCGACCCCACCGATCGTCCTATCATCAAAGAAATGGATTTCTTCTCTTCTGCTTCACCCGTTAAATCTTTTGAGACCAGAAATCACCAGCCCCAAGATCCCCACGACCGGATCAATCACGACGGATCATCAAGTGCTCCCTTACCTGATCGCCCCGTCAACACTGGACTGAATTTGAACTGTGCAAGTCCTGGAATGCCAAGATCAGAAAAGGAGATGCTCAATACTGAACCAAGTTTGAGTGCACTTCAAGGGGAATTGCGGAGGCTGCATGAAGAGAATCAGAAGTTGAAAAATATGCTGGAACAGATCACGAAAAGCTATAACCAGCTGCAGGCACATCTGTTCATCGCTTTGTATGAACAAAAGGCTCAGAAGGTTGACGCAAATGGTATGTTGTCGGGACAAGAGAAAATATTGGACCCACGGGCGTCTACCAAATTACACGTCAACAATTCGGTTTCAGACGTCGATAAGACTGGAGAGCTTTCAGTCTCTCCTTCATCAAACAACGCGGAGGTAATGTCAAAGCAACGTGACCACCGCAGCTATCAGTCACCTAAACTTCACGGAAAGGAAGCAGCTTGTCCTGAAAATGTTTCCACGTCGCAAGATCTCAAAAGCGAAGAACCAAAGGCGGACATTCATTTCAGAAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCTTCTGATTAGTGATGGATGTCAGTGGAGGAAATATGGTCAAAAAATGGCCAAAGGTAACCCTTGTCCTCGCGCCTACTATCGTTGTACCATGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAGAGATGTGCGGAAGACAAGACGGTGCTGATAACAACGTATGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCGCGATGGCAAATACGACATCGGCAGCCGCAGCGATGCTTCTATCAGGTTCAACCGTGAACAGTGAAGCCTTAACAAATTCAGGTGGAGGGCACTTGTCTTCTATGCCCTACGCTTCAATGGCAACCCTATCAGCCTCTGGACCGTTCCCTACTATCACTTTGGACTTGACTCGGACCCCCAGAAGCGCGCAGCTTCACCGGTCACCGTCCAATGGGGTTACGTTTCCTCTACCGTTGCACGGTCACCCACTGCAGCAAATGGGGCAGTCTATGTTGTTTCCTCATCAGAAGCCACAGTTAGGGCAGCAACGAGAGCCTTCTATGGTGGAGACGATGAGTGCAGCCATTGCCTCCGATCCCAACTTCACTGCGGCGCTGGCGGCGGCAATCTCGTCTATCTTTGGGAGTAATGTGGATAGCGATGGTGGGAGTGGAAATGGAAATGCTATTCCCCTTCTTGGGATTCCTCCGTCGACTCAGCTTCCTCCGTCCTGCACTACATTCTCCACCAACTAG 1491 0.503 MENQRRRRELSSISSGDFLRQNLDPMSTDPTDRPIIKEMDFFSSASPVKSFETRNHQPQDPHDRINHDGSSSAPLPDRPVNTGLNLNCASPGMPRSEKEMLNTEPSLSALQGELRRLHEENQKLKNMLEQITKSYNQLQAHLFIALYEQKAQKVDANGMLSGQEKILDPRASTKLHVNNSVSDVDKTGELSVSPSSNNAEVMSKQRDHRSYQSPKLHGKEAACPENVSTSQDLKSEEPKADIHFRKARVSVRARSEALLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTVNSEALTNSGGGHLSSMPYASMATLSASGPFPTITLDLTRTPRSAQLHRSPSNGVTFPLPLHGHPLQQMGQSMLFPHQKPQLGQQREPSMVETMSAAIASDPNFTAALAAAISSIFGSNVDSDGGSGNGNAIPLLGIPPSTQLPPSCTTFSTN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5099g00009 496 FunFam probable WRKY transcription factor 31 245 322 - -
Pral5099g00009 496 SUPERFAMILY WRKY DNA-binding domain 254 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5099g00009 496 Gene3D WRKY domain 245 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5099g00009 496 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 465 IPR044810 GO:0003700
Pral5099g00009 496 MobiDBLite consensus disorder prediction 1 80 - -
Pral5099g00009 496 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5099g00009 496 MobiDBLite consensus disorder prediction 185 237 - -
Pral5099g00009 496 MobiDBLite consensus disorder prediction 14 28 - -
Pral5099g00009 496 Coils Coil 107 141 - -
Pral5099g00009 496 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5099g00009 496 MobiDBLite consensus disorder prediction 185 201 - -
Pral5099g00009 496 Pfam WRKY DNA -binding domain 262 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5099g00009 Pral-Chr5099 49738 52690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5099g00009 2 496 WRKY Transcription Factor Family AT4G01720 42.185 7.21e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5099g00009 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5099g00009 - - pcin:129287022 680.633