Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5099g00008 ATGGAAAACCAACGACGCCGCCGTGAATTGAGCTCCATTAGCTCCGGCGACTTTCTCCGGCAGAATTTAGATCCAATGAGCACCGACCCCACCGATCGTCCTATCATCAAAGAAATGGATTTCTTCTCTTCTGCTTCACCCGTTAAATCTTTTGAGACCAGAAATCACCAGCCCCAAGATCCCCACGACCGGATCAATCACGACGGATCATCAAGTGCTCCCTTACCTGATCGCCCCGTCAACACTGGACTGAATTTGAACTGTGCAAGTCCTGGAATGCCAAGATCAGAAAAGGAGATGCTCAATACTGAACCAAGTTTGAGTGCACTTCAAGGGGAATTGCGGAGGCTGCATGAAGAGAATCAGAAGTTGAAAAATATGCTGGAACAGATCACGAAAAGCTATAACCAGCTGCAGGCACATCTGTTCATCGCTTTGTATGAACAAAAGGCTCAGGTTGACGCAAATGGTATGTTGTCGGGACAAGAGAAAATATTGGACCCACGGGCGTCTACCAAATTACACGTCAACAATTCGGTTTCAGACGTCGATAAGACTGGAGAGCTTTCAGTCTCTCCTTCATCAAACAACGCGGAGGTAATGTCAAAGCAACGTGACCACCGCAGCTATCAGTCACCTAAACTTCACGGAAAGGAAGCAGCTTGTCCTGAAAATGTTTCCACGTCGCAAGATCTCAAAAGCGAAGAACCAAAGGCGGACATTCATTTCAGAAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCTTCTGATTAGTGATGGATGTCAGTGGAGGAAATATGGTCAAAAAATGGCCAAAGGTAACCCTTGTCCTCGCGCCTACTATCGTTGTACCATGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAGAGATGTGCGGAAGACAAGACGGTGCTGATAACAACGTATGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCGCGATGGCAAATACGACATCGGCAGCCGCAGCGATGCTTCTATCAGGTTCAACCGTGAACAGTGAAGCCTTAACAAATTCAGGTGGAGGGCACTTGTCTTCTATGCCCTACGCTTCAATGGCAACCCTATCAGCCTCTGGACCGTTCCCTACTATCACTTTGGACTTGACTCGGACCCCCAGAAGCGCGCAGCTTCACCGGTCACCGTCCAATGGGGTTACGTTTCCTCTACCGTTGCACGGTCACCCACTGCAGCAAATGGGGCAGTCTATGTTGTTTCCTCATCAGAAGCCACAGTTAGGGCAGCAACGAGAGCCTTCTATGGTGGAGACGATGAGTGCAGCCATTGCCTCCGATCCCAACTTCACTGCGGCGCTGGCGGCGGCAATCTCGTCTATCTTTGGGAGTAATGTGGATAGCGATGGTGGGAGTGGAAATGGAAATGCTATTCCCCTTCTTGGGATTCCTCCGTCGACTCAGCTTCCTCCGTCCTGCACTACATTCTCCACCAACTAG 1488 0.5034 MENQRRRRELSSISSGDFLRQNLDPMSTDPTDRPIIKEMDFFSSASPVKSFETRNHQPQDPHDRINHDGSSSAPLPDRPVNTGLNLNCASPGMPRSEKEMLNTEPSLSALQGELRRLHEENQKLKNMLEQITKSYNQLQAHLFIALYEQKAQVDANGMLSGQEKILDPRASTKLHVNNSVSDVDKTGELSVSPSSNNAEVMSKQRDHRSYQSPKLHGKEAACPENVSTSQDLKSEEPKADIHFRKARVSVRARSEALLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTVNSEALTNSGGGHLSSMPYASMATLSASGPFPTITLDLTRTPRSAQLHRSPSNGVTFPLPLHGHPLQQMGQSMLFPHQKPQLGQQREPSMVETMSAAIASDPNFTAALAAAISSIFGSNVDSDGGSGNGNAIPLLGIPPSTQLPPSCTTFSTN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5099g00008 495 MobiDBLite consensus disorder prediction 184 236 - -
Pral5099g00008 495 Gene3D WRKY domain 244 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5099g00008 495 SUPERFAMILY WRKY DNA-binding domain 253 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5099g00008 495 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 464 IPR044810 GO:0003700
Pral5099g00008 495 FunFam probable WRKY transcription factor 31 244 321 - -
Pral5099g00008 495 MobiDBLite consensus disorder prediction 184 200 - -
Pral5099g00008 495 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5099g00008 495 MobiDBLite consensus disorder prediction 1 80 - -
Pral5099g00008 495 MobiDBLite consensus disorder prediction 14 28 - -
Pral5099g00008 495 Coils Coil 107 141 - -
Pral5099g00008 495 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5099g00008 495 Pfam WRKY DNA -binding domain 261 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5099g00008 Pral-Chr5099 49737 52690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5099g00008 2 495 WRKY Transcription Factor Family AT4G01720 42.453 2.21e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5099g00008 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5099g00008 - - pcin:129287022 676.011