Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5099g00003 ATGAGAAATTGCTCAGGCATATCACTAAGTATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCAAGCAGAGATGTGGAAAGAGCTGTAGGCTGAGGTGGATCAATTACCTGAGGCCTGATTTGAAGAGAGGCACATTCTCACAAGAAGAGGAGAACCTCATCATTGAGCTTCATGCAGTATTAGGGAATAGATGGTCGCAAATTGCAGCACAGCTGCCAGGAAGAACGGATAATGAAATAAAGAATCTGTGGAATTCATGCCTCAAGAAGAAGCTGAGGCAACAAGGGATAGACCCTGTGACCCATAAACCACTGTCGGAGATTGAGAATGGAGATCAGGACAAAGATGGAGAGAAAGTTGCAGCAGTTAGTTCCAGTGAATTGAACCTCCTGAAATCAGAAAGCTCCAGGTCCGATGGAGCTTCCTACGAGCACAAACCAGGTTCAAGTATTGCCCATAAAGCCTATGCACACGACATGGAGGGTTCTTCTTCTACCTCCAAGATTAACACCAGAAGCAACACTAATTTCATCCCCGATTGTTCCAGTAAAGAGTTGTTACTGGACAGCAGGTTCATCAACAGTCACCAGGAAATCTACACCACTTCAGATTTCATGACGAATTTCCCTCTTCAAATGACCTATACGAATCCATCCACTGACTCTTCTCGTTGGTTCACTCAAACTGGAGGAAGATCATTTGATATAAATACTGAATTTACCTCCAGTACCATGTCCACTGCCTTTCCACTTTCAACCTCCTCATTCCTCCCTACTTCCGTCTGCTACAAGCCTTCTCTCCCCGTTCCATCTGAGGATATCTCTACTGGTTCCTTCCCTGTGAATGAACCCCGGTACTGGGAAGCCAGTGCTTCCAACCATAGCAATAGAAACGGCCCCTTGAACTTGCAGAACAGTATTGTTTCTTGGGGATTGACAGACTGTGGTGGTACTCCTGCTAAGGAGGCTCATCACCAGATTAATATGATGGAGAGTCAGACGGAAGAAGCCAGGTGGGCTGAGTACCTTCATGGTAACCCAATCTTAATGCTGGCTGCTGTACAGAATCAAGGTTCAGAATCCTTATGCAACGATATAAGGCCAGCCTCACATTTGGTACCGGAGTCTTTAGGAGCTATTTTGCCTTATCATCACAAGCAGCAAGATCATCAAGCTTCTGCAATATTCTCAAAGGACATCCAGAAGCTCACTGCAGCTTTCGGACACATATAG 1233 0.4574 MRNCSGISLSMAMAAGALFLSKQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQQGIDPVTHKPLSEIENGDQDKDGEKVAAVSSSELNLLKSESSRSDGASYEHKPGSSIAHKAYAHDMEGSSSTSKINTRSNTNFIPDCSSKELLLDSRFINSHQEIYTTSDFMTNFPLQMTYTNPSTDSSRWFTQTGGRSFDINTEFTSSTMSTAFPLSTSSFLPTSVCYKPSLPVPSEDISTGSFPVNEPRYWEASASNHSNRNGPLNLQNSIVSWGLTDCGGTPAKEAHHQINMMESQTEEARWAEYLHGNPILMLAAVQNQGSESLCNDIRPASHLVPESLGAILPYHHKQQDHQASAIFSKDIQKLTAAFGHI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5099g00003 410 MobiDBLite consensus disorder prediction 105 121 - -
Pral5099g00003 410 SUPERFAMILY Homeodomain-like 23 97 IPR009057 -
Pral5099g00003 410 SMART sant 42 90 IPR001005 -
Pral5099g00003 410 Gene3D - 45 119 - -
Pral5099g00003 410 PANTHER MYB DOMAIN PROTEIN 55 23 322 - -
Pral5099g00003 410 ProSiteProfiles Myb-like domain profile. 38 88 IPR001005 -
Pral5099g00003 410 CDD SANT 45 85 IPR001005 -
Pral5099g00003 410 FunFam MYB transcription factor 44 116 - -
Pral5099g00003 410 Gene3D - 7 42 - -
Pral5099g00003 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 92 IPR017930 -
Pral5099g00003 410 MobiDBLite consensus disorder prediction 98 123 - -
Pral5099g00003 410 Pfam Myb-like DNA-binding domain 43 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5099g00003 Pral-Chr5099 7648 9459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5099g00003 23 115 MYB Transcription Factor Family AT4G01680 90.323 9.47e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5099g00003 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5099g00003 K09422 - gmx:100782199 432.18