Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5098g00015 ATGGGTAACGGCACCTCACGTGTTGTTGGCTGTTTAGTGCCATTTAATGGCAAAAATGGAGTTGATTTGGAGTTCCTAGAGCCACTAGACGAGGGATTAGGCCATTCTTTCTGTTATGTGCGGCCATCTATTTTTGAATCTCCTGCCATTACACCATCAAACTCTGAGAGGTTTACTGTTGATTCGAGTACCCTTGATTCTGAAACTTTTAGTGGCTCGTTTAGGCATGACAGTATGGAAGATCCCTCTGGCATACACAAACCGGCCAAGTGCTTCCCAGAGACCACATTCAGAACGATTTCAGGGGCTTCAGTCAGTGCCAATGTCTCAACCGCAAGGACTGGTAACCAGAGTGCATTATTTTCTAGTGATGTCCAAGAGCCAGCTGCATCATTTGAGGGAACCTCTTCATTTGCTGCAATCCCTCTGCAACCTGTTCCCCGTGGTTCTGGAACTTCAAATGGTTTCATGTCTGGACCTCTAGAGAGAGGCTTTGCTTCAGGTCCATTGGATAGGGGTGGCGGTGGTTTCATGTCTGGACCAATAGAGAGGGGAGTCATGTCAGGTCCTCTTGATTCCACTGACAAATCCAACTTTTCTGCACCGCTTGCACGAGGCGGTCGCAGGCCACGCCTCCAACAGCTCATGAGAAGTGTGAGTGGACCAATGAAAAACACTTTCTCCCGGACCTTCTCTAAGCATTCTAGTGGTGGGAGTTGGATGCAGCGGGTGTTCTTTCACCCAGTGACCCAATTGGCTTGGCATTCCAAAGATGCAAAGTTTCGACAAGAAGTCTCTAGAAACTGTATTGAAGTTGGGACATCTGAAGGGGAGTATAAGCATCCACACAATTTACAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCATGTGGTACTTTCTGAAGAACAAGGTTGGTTGTTTATTGGGATATATGATGGCTTTAGCGGACCAGATGCTCCTGATTTTTTGATGAACCATCTTTACAGATTTGTAGACAAAGAACTGGAAGGGTTGCTTTGGGATTATGAATTTAATCCTGTAGATCCACTTCAACCTCAAATCCCTAAAACTAGAAATGCTGTGGTTGCTCCCGAGTACGGCCAGGAGGAACAGTCAGTCAATCATACTAATTCAAACCAAGATACTCTGTGTTCTTTAGAAGCTTCTTCTGGTTCAGAAAATGCCAAGGAGCAATCATCTTGCGCTGAGATTGTTGAGGAAAACATCGCATTTAAGGTAAATATTGAAAACCAATTACATAATTCTGGAAGTCCCAGTAACTCAGATGCTGTGCTTCCTTCCGTTCCTCTTGGACAGTTAAGTGGACAAGGTAGAAAAAGCATGCGGCTTTATGAGTTACTTCAGATGGAATCTTGGAATGAACGAGATTCCTTGTCTGTCTCAGAACAAGGCAAGGATTCTTATGTTCCTACAGAATCAACACAGGCAGGGTGGATGAGAACTTTTTCAACTAATGCAAAAGAAGATAGTTCTAGACATCTGGACGAAGCGCCCACCACATCAGGGGAAAATGGAGGGATTGGGTCTGAACCAGTTACTCGAGAGCCTGTAACTGCATCTACTGTTCTGGGACAAAGGCAGAATACCAGAAAGTCATTTCTTGGTACCAAAATTAAAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAGCTTTTTCCTTGGAGCTATGATTGGCATAGGGAAGAAACTGGGGCTGATGAGAAAATATTAGAAGTCTCAGGGCCCATTAGAAAATGCAAATCTGGGGTAGTTGATCATGATGCAGTTTTAAGAGCAATGACTCGAGCTCTTGACAGAACAGAAGAGGCATACATGGAAATGGTGGAGAATAATCTAGATAAAAATCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGGGATAGTCGTGTAATTTTGGCTCAAGAAAGGCCAAATGATCGTCATCCTAATTCAACTTTTGGCAAGGATGATGTGAGGCACAGAAATCGATCTAGAGAGTCATTAGTACGGATGGAGCTGGATAGAATCTCGGAGGAGTCCCCAATTCACAATCAAAACAGTCATATTCACAAGATGAACAAAAACAGAGAGATAGCGATTTGCAGATTAAAAATGAGAGCTGTTCAGCTTTCCACTGATCACAGCACAAATGTTGAAGAGGAAGTTTTCAGAATAAGGGCAGAACACCCTGATGATAATCAATCAATCTGTAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCGTTTGGTGCTGGATTCCTGAAGAGGGCGTCTTTTAATGAAGTTCTACTGGAGAGGTTCCGAGTCGATTATGTGGGCACTGCTCCTTACCTTAGTTGCACTCCTTCTATTCTGCATCACCGACTTTCTTCTAGTGATCGGTTCTTGGTACTCTCCTCTGACGGACTTTACCAATACTTCAGCAATGAAGAGGTAGTTGCTCACATTACTTGGTTTATGGAGAATGTGCCTGAAGGCGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCCGTGCCGCTAAAAAGAATGGAATGGATTTTTACGAATTGCTTGACATTCCTCATGGAGATCGACGCAAATACCATGACGACGTTTCTGTTATGGTGGTTTCTCTAGAGGGAAGGATTTGGAGATCGTCTGGATGA 2709 0.4382 MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETFSGSFRHDSMEDPSGIHKPAKCFPETTFRTISGASVSANVSTARTGNQSALFSSDVQEPAASFEGTSSFAAIPLQPVPRGSGTSNGFMSGPLERGFASGPLDRGGGGFMSGPIERGVMSGPLDSTDKSNFSAPLARGGRRPRLQQLMRSVSGPMKNTFSRTFSKHSSGGSWMQRVFFHPVTQLAWHSKDAKFRQEVSRNCIEVGTSEGEYKHPHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMNHLYRFVDKELEGLLWDYEFNPVDPLQPQIPKTRNAVVAPEYGQEEQSVNHTNSNQDTLCSLEASSGSENAKEQSSCAEIVEENIAFKVNIENQLHNSGSPSNSDAVLPSVPLGQLSGQGRKSMRLYELLQMESWNERDSLSVSEQGKDSYVPTESTQAGWMRTFSTNAKEDSSRHLDEAPTTSGENGGIGSEPVTREPVTASTVLGQRQNTRKSFLGTKIKKMYRKQKSLRKKLFPWSYDWHREETGADEKILEVSGPIRKCKSGVVDHDAVLRAMTRALDRTEEAYMEMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNSTFGKDDVRHRNRSRESLVRMELDRISEESPIHNQNSHIHKMNKNREIAICRLKMRAVQLSTDHSTNVEEEVFRIRAEHPDDNQSICNDRVKGQLKVTRAFGAGFLKRASFNEVLLERFRVDYVGTAPYLSCTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHITWFMENVPEGDPAQYLIAELLFRAAKKNGMDFYELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5098g00015 902 FunFam Protein phosphatase 2C 32 255 426 - -
Pral5098g00015 902 Coils Coil 600 620 - -
Pral5098g00015 902 CDD PP2Cc 595 893 IPR001932 -
Pral5098g00015 902 MobiDBLite consensus disorder prediction 463 482 - -
Pral5098g00015 902 Gene3D - 535 899 IPR036457 -
Pral5098g00015 902 SUPERFAMILY PP2C-like 291 894 IPR036457 -
Pral5098g00015 902 MobiDBLite consensus disorder prediction 493 530 - -
Pral5098g00015 902 Gene3D - 255 431 IPR036457 -
Pral5098g00015 902 PANTHER PROTEIN PHOSPHATASE 2C 278 892 IPR015655 GO:0004722|GO:0006470
Pral5098g00015 902 MobiDBLite consensus disorder prediction 149 208 - -
Pral5098g00015 902 ProSiteProfiles PPM-type phosphatase domain profile. 278 893 IPR001932 -
Pral5098g00015 902 MobiDBLite consensus disorder prediction 422 444 - -
Pral5098g00015 902 Pfam Protein phosphatase 2C 717 863 IPR001932 -
Pral5098g00015 902 SMART PP2C_4 278 891 IPR001932 -
Pral5098g00015 902 MobiDBLite consensus disorder prediction 422 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5098g00015 Pral-Chr5098 50416 56349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5098g00015 1 902 PP2C-type Phosphatase Gene Family AT2G46920 64.435 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5098g00015 - - pcin:129315875 1702.57