Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5096g00003 ATGACAACTAGAGATGAAGATGTCCTTCAAAAATATGAGGTTAATACCATTTATAGACCTAAACTCTTGTCCAAGGACGAAGGTTTCAAACTATTTTGTTCTAAAGCTTTTCTAGGGGGATATCCGATTGATGATTTCGAAGGGATAATATATAGGGTGTTGGAATATGCTAATGGCCTTCCATTAGCAATTGAAATATTGGGTTCATCCATTTTTGGAAAAGGCGTTGCAGAATGGAGAAGTTTTCTGGATAGAGAAGAAATTATTCCGCCCTATAAGATCATAAGGGTGCTTACAAAAAGTTTTGACGAACTTGATCACATGAGTAAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTTGGGAAGGACATTAACACTGTGTTTGGCTTGACCGAAGGAAAGAGAAGGGAGAAAAGGGGAGGATAG 429 0.3753 MTTRDEDVLQKYEVNTIYRPKLLSKDEGFKLFCSKAFLGGYPIDDFEGIIYRVLEYANGLPLAIEILGSSIFGKGVAEWRSFLDREEIIPPYKIIRVLTKSFDELDHMSKEMFLDIACFFVGKDINTVFGLTEGKRREKRGG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5096g00003 142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 124 IPR044974 GO:0006952
Pral5096g00003 142 Gene3D - 22 106 IPR042197 -
Pral5096g00003 142 Pfam NB-ARC domain 1 82 IPR002182 GO:0043531
Pral5096g00003 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 116 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5096g00003 Pral-Chr5096 75873 76301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5096g00003 1 134 WRKY Transcription Factor Family AT5G45050 33.088 2.78e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5096g00003 - - pcin:129300842 175.252