Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5096g00002 ATGAGTTATCCTAGCCTCCCAGGTAGCTCATCTTCTCGGAGGACCTGGAAATACGAAGTTTTTCTGAGTTTCAGAGGCGAGGATACTCGCAACAAGTTCGCTGGTCATCTTTTTTCTGCTCTTCAACGGAAAGGTATATTTACTTTCAGGGATGACAAAAGGCTCGAGAAAGGACAATCCATTAAACCGGAGCTCCTCAAAGCAATCGAGCAATCCCGAATTTCTCTTGTCGTCTTCTCCCAAAACTATGCCGATTCATCATGGTGCCTGGAAGAACTGGAAAAGATATCTCAGGGAATTGGCGAACCGGGATACTTTGTTGTACCAATTTTCGTCGATATCGATCCTTCTGATGTTCGAAAACAGGATGGAAATTATAGAAAATTCTTTGATAAGCATGAAGAAGACTTCAAGGATAATATAGATAAGGTACAAAGATGGAGGTTAGCATTGAATCAAGTAGCTGGTCTCGTTGGTTATGATGTTCGGAATAAATCAGAATCAGATGTTATTGATGAAATTGTTCAAGATGCAGCAAGCAAATTGAGACATAGATTCGCAAATCTGGTTGATGATCTAGTTGGGATGCAATCTCGTGCAGAAGCATTTGAAAGCCTTTTAGATTTAGAATCAGATGAAGTTCGAAAGGTAGGGGGGATGTGGGGGATGCCTGGAGTAGGGAAGACTACTCTAGCTGCTGTTGTATATGATAGAATCTCTCACAGATTTGATGCTTGTTGTTTTCTTGATGTAAGTAAAGTTTACGAGGGTCCTGGACTTGTCCGTCTACAAGAGAAACTCCTCTGGGAAACACTGCACTTAAAGATGGAGATAGGGGACGTGAACAGGGGAACCGAATTAATAAGAACCAGGCTTCAACACCTTAAAACTCTTATTGTTGTTGACAATGTTGATCATGATGATCAATTGGAGAAACTGATAGGAAATCCCACATGGTTGGGGCCGGGTAGTAGGATCATCATAACAACAAGAGATTCACATATCCTAAAGGTCTATGGGGTGGATGAAATTTACGAGGTTAAACATCTGAATGATGATGAAGCTCTTCAACTTCTCTGTAGAAGAGCCTTCAAGCAAGATGATCCCTTGAGCGACTTTAAACGTGGGAAGATCAGTTAG 1140 0.414 MSYPSLPGSSSSRRTWKYEVFLSFRGEDTRNKFAGHLFSALQRKGIFTFRDDKRLEKGQSIKPELLKAIEQSRISLVVFSQNYADSSWCLEELEKISQGIGEPGYFVVPIFVDIDPSDVRKQDGNYRKFFDKHEEDFKDNIDKVQRWRLALNQVAGLVGYDVRNKSESDVIDEIVQDAASKLRHRFANLVDDLVGMQSRAEAFESLLDLESDEVRKVGGMWGMPGVGKTTLAAVVYDRISHRFDACCFLDVSKVYEGPGLVRLQEKLLWETLHLKMEIGDVNRGTELIRTRLQHLKTLIVVDNVDHDDQLEKLIGNPTWLGPGSRIIITTRDSHILKVYGVDEIYEVKHLNDDEALQLLCRRAFKQDDPLSDFKRGKIS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5096g00002 379 Gene3D - 172 343 IPR027417 -
Pral5096g00002 379 Pfam NB-ARC domain 211 368 IPR002182 GO:0043531
Pral5096g00002 379 SMART till_3 17 157 IPR000157 GO:0007165
Pral5096g00002 379 Pfam TIR domain 17 184 IPR000157 GO:0007165
Pral5096g00002 379 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Pral5096g00002 379 Gene3D - 2 155 IPR035897 -
Pral5096g00002 379 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 369 IPR044974 GO:0006952
Pral5096g00002 379 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pral5096g00002 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 372 IPR027417 -
Pral5096g00002 379 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral5096g00002 379 PRINTS Disease resistance protein signature 291 305 - -
Pral5096g00002 379 PRINTS Disease resistance protein signature 217 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5096g00002 Pral-Chr5096 40825 42176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5096g00002 7 361 WRKY Transcription Factor Family AT4G12020 31.111 5.29e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5096g00002 - - pcin:129315185 497.278