Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00093 ATGGATCCGGAGGGAGGATCCCATGACGGATCTAGCTACTACGCCATCCTCGGGATTCCCAGGGACGCCTCCTTCTCTGATGTCCGTACCGCCTATCGGAACCTCGCTTTGAAGTGGCACCCGGACAGATGGGCTGGAAACATTGCAATAATCGGAGAAGCCAAGCGGCGATTCCAGCAAATTCAAGAAGCTTACTCAGTTCTTTCCGATAAGTCTAAAAGGTCAATGTACGACGCCGGATTCTACGATCCTTTAGAAGAAGAAGACGAAGAATTCTGTGACTTCATGAACGAAATGATCTCGATGATGAACAATGTGAAGGATGAGGGGAACAGTTTGGAAGATCTACAAAGGATGTTCGTAGAAATGGTTGGCGGAGATGAGATGAGCTTCGAGTCGAAGGATGAGCAAACGAGCGGCAAGAGGGGACGTGTCAGTGCGCCAAGGGGCAGCGCAGCTAAACGCAGCAACTCTCGCCGCTAG 483 0.5093 MDPEGGSHDGSSYYAILGIPRDASFSDVRTAYRNLALKWHPDRWAGNIAIIGEAKRRFQQIQEAYSVLSDKSKRSMYDAGFYDPLEEEDEEFCDFMNEMISMMNNVKDEGNSLEDLQRMFVEMVGGDEMSFESKDEQTSGKRGRVSAPRGSAAKRSNSRR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00093 160 CDD DnaJ 13 70 IPR001623 -
Pral5095g00093 160 MobiDBLite consensus disorder prediction 128 142 - -
Pral5095g00093 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral5095g00093 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pral5095g00093 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pral5095g00093 160 MobiDBLite consensus disorder prediction 127 160 - -
Pral5095g00093 160 Gene3D DnaJ domain 4 102 IPR036869 -
Pral5095g00093 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pral5095g00093 160 Pfam DnaJ domain 13 78 IPR001623 -
Pral5095g00093 160 SMART dnaj_3 11 73 IPR001623 -
Pral5095g00093 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pral5095g00093 160 PANTHER PUTATIVE, EXPRESSED-RELATED 7 140 - -
Pral5095g00093 160 SUPERFAMILY Chaperone J-domain 11 84 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00093 Pral-Chr5095 387836 389362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00093 13 79 C2H2 Transcription Factor Family AT1G74250 39.706 2.42e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00093 - - gmx:548049 244.588