Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00091 ATGGTAATGATGGATATAAAGGTGAAGGAATCTTCATCGGATGAATCGGGTGACGTCAATAAGTGCTGCACTGATTGCAGAACCACGAAAACCCCACTCTGGAGAGGAGGGCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGACGTCTGCGGTCAGATTCAACAGAGGGCTGGATGGGAAAAGAGATAGAGCTCATAATTCTAGCGGTGACGCTGCTGATGCTGTCACCGTCACCGTCATCTCCACCGCTGCTACAGCCACTAATGACAATCAGGTGAGGGAATCGGTGGAAAGGAACACGATAGGATGGAGTGAGGAGGTTTCATTGCAGAGCGTGCCGGCGGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGTTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTATTTTCGCTTAG 471 0.5011 MVMMDIKVKESSSDESGDVNKCCTDCRTTKTPLWRGGPAGPKTLCNACGIRYRKRRTSAVRFNRGLDGKRDRAHNSSGDAADAVTVTVISTAATATNDNQVRESVERNTIGWSEEVSLQSVPAVLKKQRCQRKRKLGEVEEAAFCLMALSCGFIFA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00091 156 SMART GATA_3 17 69 IPR000679 GO:0006355|GO:0043565
Pral5095g00091 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 16 57 - -
Pral5095g00091 156 Pfam GATA zinc finger 23 57 IPR000679 GO:0006355|GO:0043565
Pral5095g00091 156 ProSiteProfiles GATA-type zinc finger domain profile. 23 53 IPR000679 GO:0006355|GO:0043565
Pral5095g00091 156 CDD ZnF_GATA 23 57 IPR000679 GO:0006355|GO:0043565
Pral5095g00091 156 Gene3D - 18 82 IPR013088 GO:0006355|GO:0008270
Pral5095g00091 156 ProSitePatterns GATA-type zinc finger domain. 23 48 IPR000679 GO:0006355|GO:0043565
Pral5095g00091 156 PANTHER OS01G0976800 PROTEIN 9 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00091 Pral-Chr5095 376390 378777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00091 18 156 C2C2-Gata Transcription Factor Family AT3G16870 38.562 1.37e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral5095g00091 GATA 6.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00091 - - pcin:129306793 236.113