Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00090 ATGGTAATGATGGATATAAAGGAATCTTCATCGGATGAATCGGGTGACGTCAATAAGTGCTGCACTGATTGCAGAACCACGAAAACCCCACTCTGGAGAGGAGGGCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGACGTCTGCGGTCAGATTCAACAGAGGGCTGGATGGGAAAAGAGATAGAGCTCATAATTCTAGCGGTGACGCTGCTGATGCTGTCACCGTCACCGTCATCTCCACCGCTGCTACAGCCACTAATGACAATCAGGTGAGGGAATCGGTGGAAAGGAACACGATAGGATGGAGTGAGGAGGTTTCATTGCAGAGCGTGCCGGCGGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGTTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTATTTTCGCTTAG 465 0.5011 MVMMDIKESSSDESGDVNKCCTDCRTTKTPLWRGGPAGPKTLCNACGIRYRKRRTSAVRFNRGLDGKRDRAHNSSGDAADAVTVTVISTAATATNDNQVRESVERNTIGWSEEVSLQSVPAVLKKQRCQRKRKLGEVEEAAFCLMALSCGFIFA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00090 154 ProSitePatterns GATA-type zinc finger domain. 21 46 IPR000679 GO:0006355|GO:0043565
Pral5095g00090 154 Pfam GATA zinc finger 21 55 IPR000679 GO:0006355|GO:0043565
Pral5095g00090 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 14 55 - -
Pral5095g00090 154 Gene3D - 16 80 IPR013088 GO:0006355|GO:0008270
Pral5095g00090 154 CDD ZnF_GATA 21 55 IPR000679 GO:0006355|GO:0043565
Pral5095g00090 154 ProSiteProfiles GATA-type zinc finger domain profile. 21 51 IPR000679 GO:0006355|GO:0043565
Pral5095g00090 154 PANTHER OS01G0976800 PROTEIN 9 153 - -
Pral5095g00090 154 SMART GATA_3 15 67 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00090 Pral-Chr5095 376390 378777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00090 16 154 C2C2-Gata Transcription Factor Family AT3G16870 38.562 1.19e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral5095g00090 GATA 6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00090 - - pcin:129306793 229.95