Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00078 ATGGCCCAGCCCCTTCATTTTCTTTTCATTCTCATCCTTTTACCTTGCTTGAAAATTGAAGCTTTCTTGGACGAAGTCCCCTCCGACACCAGCAACCAGTTAGACCTCCACGCCATGATTGCCAAGGTCTGCATGGACGTGGAAGACCAAAACACATGCCTCACCAATATCCAGAACGAGATCGTCAAGCATGGGCCTCCCACCCCATCTTCAGTTGTCACTGCCGCACTCCGAGCCACTCTCAACGAGGCCATGGGTGCCATTGACAAAATCTCCAAGTTCAGCACTTTCTCCATTAGTTATCGCGAGCAAGTAGCCATCCAAGACTGCAAGGAGCTCCTTGATTTCTCTGTGTCGGAGCTGGCCTGGTCGCTGGGCGAGATGAGGAGAATTCGTGCGGGTGATGAAAGCGTTGATTATGACGGAGACCTCCAGGCTTGGCTAAGTGCAGCACTCAGCAACCAGGACACGTGTCTCGAGGGCTTCGAGGGCACCGACCGGCGCCTTCAGGGTTACATCAGCGGAAGCTTGACGCAAGTCACCCAGCTTATAAGCAACGTTTTGGCTTTGTACACTCAACTGCACAGCTTACCCTTTAGGTCTCCGGCGAATAAAACCCGATTAGCAAATTATCAGAGCTCGGAGTTTCCGGAATGGATGACGGAGGGAGATCAGGAGCTGCTCAGATCTCCGCCGCGAGGGGTGCATGCGGACGCTGTTGTGGCGTTGGACGGGAGCGGCCATTACCGTTCCATCTCGGAAGCCGTCGATGCAGCTCCAAGGCAGAGCAAAGGGAGGTATGTTATTTACGTGACAAAGGGGATTTATAAAGAGAACGTGGATCTGAAGAGGACGAAGCCCAACATCATGCTCGTAGGAGAAGGTATTGGCAAGACCATCGTCACAGGCAACCGCAATTTCATGCAAGGATGGACTACTTTTCGAACCGCAACAGTTGCTGTGTCGGGAAAGGGATTCATAGCAAGGGACATGTCGTTTCGAAACACAGCAGGACCAGTGAACCATCAAGCTGTGGCTCTGCGGGTGGATTCAGACCAATCAGCGTTCTACAGGTGTAGCATAGAAGGTCACCAAGACACACTGTATGCCCACTCACTCAGACAATTCTACCGTGAATGCGAAATCTACGGCACCATAGACTTCATATTCGGGAACGGAGCCGCCGTGCTGCAGAACTGCAAGTTGTACACGAGAGTGCCGCTGCCATTGCAGAAGGTCACCATAACGGCGCAGGGCAGAAAAAGCCCACACCAGAACACGGGGTTTGTAATCCAGGACAGCTTTGTTCTGGCCACTCAACCCACCTATTTGGGCAGGCCATGGAAGCAGTTCTCAAGAACAGTGTACATCAACACCTACATGAGTGGCCTTGTGCAGCCCAGAGGGTGGCTCGAGTGGGCTGGAAACTTCGCCTTGAACACCTTGTGGTACGGCGAGTATAAGAACTACGGACCTGGTTCCGCCCTGGGGGGGAGGGTCAAGTGGCCTGGTTTTCACATTATTAAAGATCCCGCCGCCGCCAACGATTTCACTGTTCAGCACTTCATTGACGGCGGTTCGTGGTTGCCAGCAACGGGTATTAGGTTCACGGCTGGTTTGACCAATTGA 1629 0.5285 MAQPLHFLFILILLPCLKIEAFLDEVPSDTSNQLDLHAMIAKVCMDVEDQNTCLTNIQNEIVKHGPPTPSSVVTAALRATLNEAMGAIDKISKFSTFSISYREQVAIQDCKELLDFSVSELAWSLGEMRRIRAGDESVDYDGDLQAWLSAALSNQDTCLEGFEGTDRRLQGYISGSLTQVTQLISNVLALYTQLHSLPFRSPANKTRLANYQSSEFPEWMTEGDQELLRSPPRGVHADAVVALDGSGHYRSISEAVDAAPRQSKGRYVIYVTKGIYKENVDLKRTKPNIMLVGEGIGKTIVTGNRNFMQGWTTFRTATVAVSGKGFIARDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKLYTRVPLPLQKVTITAQGRKSPHQNTGFVIQDSFVLATQPTYLGRPWKQFSRTVYINTYMSGLVQPRGWLEWAGNFALNTLWYGEYKNYGPGSALGGRVKWPGFHIIKDPAAANDFTVQHFIDGGSWLPATGIRFTAGLTN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00078 542 Gene3D - 233 540 IPR012334 -
Pral5095g00078 542 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Pral5095g00078 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 195 IPR035513 -
Pral5095g00078 542 Pfam Pectinesterase 238 525 IPR000070 GO:0030599|GO:0042545
Pral5095g00078 542 SUPERFAMILY Pectin lyase-like 235 539 IPR011050 -
Pral5095g00078 542 PANTHER PECTINESTERASE 17 530 - -
Pral5095g00078 542 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Pral5095g00078 542 FunFam Pectinesterase 233 540 - -
Pral5095g00078 542 NCBIfam pectinesterase inhibitor domain 37 195 IPR006501 GO:0004857
Pral5095g00078 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 195 IPR035513 -
Pral5095g00078 542 CDD PMEI-like_4 65 194 - -
Pral5095g00078 542 SMART PMEI_2 35 190 IPR006501 GO:0004857
Pral5095g00078 542 FunFam Pectinesterase 37 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00078 Pral-Chr5095 324714 327134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00078 35 542 Carbohydrate Esterase AT3G05620 63.776 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00078 K01051 - gmx:100810565 872.078