Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00077 ATGTCCGGGGATGGACAGAACAAAAGGAGAATAGCCATCATTGCTGTGTCTTCGGTTTTACTGGTGGGCATGGTGGTCGCCGTGACGGTTGGCGTGACGTGGAAGCAATCAGATTCCGATGAGGAAGACAAGTCTTCCTCCGATAAGACCGTGTCCAACAAAGTGAAAGCGGTGCAGAGCCTGTGCGCCCCCGCCGACTACAAGAAAGAATGCGAGGAGAGCCTGGAGGAGGAGGCCGGCAACAGCACCGATCCCAAAGAACTAATCATGAAGGCCTTCAACATCACCATCAAGAAAATCGAGAAGGGTCTTCATGAATCCGACACCTTGCACGAGGTGGAGAACGATCCCCGCGCCAAGGAAGCCCTCCAGACCTGCAAGCACCTCATGGAACTTTCCATTGGCGAGTTCAGGAAATCACTCGGAACCTTCGAGTCCTTTGATTTCTACAACCTCGACAAGATTCTCATGAACCTCAAAGTTTGGCTCAGCGGAGCCATCACTTACCAGGAAACCTGCATTGAAGGGTTCGAGGACGCCAAAAGCGACGCCGGCCAGAAGATGAAGCAGGCACTCACCGCTGCCATGCACATGAGCAGCAACGGCCTCGCCATCGTCAACGACATGGCCGAAGCTTTATCCAGTTTGCACATCACGAAGCAAGGAAGGCGTCTGCTCAATGATCAGGAGGATGGCAGCGAAGATCATCATGGCGAGGCAGGTGCGAACGAAGACGGCGTGAGACCCGACGGCGACTTCGAGTTCCCCACGTGGATCGATGAAAATCCTGCCGCTAGGAGACTGCTGACGAGCGAACACAAAGGCAAACTGAAGCCAGATGTGGTCGTGGCGAAAGACGGGAGTGGGAAGTACAAGAAAATCAAGGACGCGCTAAAGCATGTGCCGAAGAAGAACAAAAAGCCGTTTGTGATCTACATCAAGGAAGGGGAGTACAAAGAGTATGTGGAAGTGGAGAAGGACATGACGTACGTTGTGTTCGTGGGGGATGGCGGCAACAAGACCCGCATCACCGGCAACAAGAACTTTGCCGACGGGGTCAACACCTATAACACCTGCACGGTGTCGGTAGAAGGGGACCACTTCATTGCCATCAACATGGGGTTCGAAAACTCGGCCGGTCCCGACGGACATCAAGCTGTGGCATTGAGGGTTCAAGCCGACTTCTCCATATTCTACAGATGCCAACTGGACGGGTACCAGGACACGCTGTACGCGCACACCATGCGTCAATTCTACAGGGACTGCGTCATCACCGGCACCATAGACTTCGTCTTCGGGGATGCCGCCGTCGTGATGCAGAACTGCACGTTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCGCAAGGGAGGAAGGAGAGGCACCAACCGTCGGCGCTGGTGATCCAAGGAGGGTCCATAGTATCGGACCCAAAGTTCTATAAAGTGAGGTTTGAGAGCAAGGCGTACCTGGCGCGTCCATGGAAGAACTTCTCAAGGACCATCATAATGGAAACCTTCATAGATGACTTGATAGACCCAGAGGGGTTTCTCAAGTGGGACGCAAACTCCACGTCCTACAAGACATGCTGGTACGGAGAGTTCAATAACACAGGGCCAGGTGCCAACACCAGGCATCGCGTCAAGTGGAACGGGATCAAGAATCTGACGGCACAGCATGCTCTGGATTTCACGCCCTTGAGGTATTTCAAGTCAGATTACTGGATTAGGGAAACTAGGATTCCTTACAATCCCACCACCATGTCCTCCCCTCCAGCTAGTCCTAAAAAGCTCTCTTCACAGTGA 1818 0.5347 MSGDGQNKRRIAIIAVSSVLLVGMVVAVTVGVTWKQSDSDEEDKSSSDKTVSNKVKAVQSLCAPADYKKECEESLEEEAGNSTDPKELIMKAFNITIKKIEKGLHESDTLHEVENDPRAKEALQTCKHLMELSIGEFRKSLGTFESFDFYNLDKILMNLKVWLSGAITYQETCIEGFEDAKSDAGQKMKQALTAAMHMSSNGLAIVNDMAEALSSLHITKQGRRLLNDQEDGSEDHHGEAGANEDGVRPDGDFEFPTWIDENPAARRLLTSEHKGKLKPDVVVAKDGSGKYKKIKDALKHVPKKNKKPFVIYIKEGEYKEYVEVEKDMTYVVFVGDGGNKTRITGNKNFADGVNTYNTCTVSVEGDHFIAINMGFENSAGPDGHQAVALRVQADFSIFYRCQLDGYQDTLYAHTMRQFYRDCVITGTIDFVFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPKFYKVRFESKAYLARPWKNFSRTIIMETFIDDLIDPEGFLKWDANSTSYKTCWYGEFNNTGPGANTRHRVKWNGIKNLTAQHALDFTPLRYFKSDYWIRETRIPYNPTTMSSPPASPKKLSSQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00077 605 SMART PMEI_2 53 205 IPR006501 GO:0004857
Pral5095g00077 605 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Pral5095g00077 605 Gene3D - 274 591 IPR012334 -
Pral5095g00077 605 NCBIfam pectinesterase inhibitor domain 49 208 IPR006501 GO:0004857
Pral5095g00077 605 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Pral5095g00077 605 FunFam Pectinesterase 54 210 - -
Pral5095g00077 605 MobiDBLite consensus disorder prediction 228 256 - -
Pral5095g00077 605 PANTHER PECTINESTERASE 16 581 - -
Pral5095g00077 605 Pfam Pectinesterase 280 576 IPR000070 GO:0030599|GO:0042545
Pral5095g00077 605 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Pral5095g00077 605 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Pral5095g00077 605 FunFam Pectinesterase 274 591 - -
Pral5095g00077 605 CDD PMEI-like_3 60 210 - -
Pral5095g00077 605 MobiDBLite consensus disorder prediction 228 255 - -
Pral5095g00077 605 SUPERFAMILY Pectin lyase-like 278 588 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00077 Pral-Chr5095 320826 322643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00077 4 598 Carbohydrate Esterase AT3G05610 46.399 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00077 K01051 - gmx:100801686 672.159