LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5095g00030	ATGAGTGTTGATCTGGAATCGTTGGCGGAGGCGACCTCTGGCGCCATAGGATCACTCTTGAGTACGACCATCTTGTACCCGCTTGACACCTGTAAGACCAAGTACCAAGCCGAGGCTCGGGCCCATGGCCACCAAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCGCTTTATCAGGGTCTGGGAACAAAAAACCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGCTACAGCTATTTTAAAAGATTGTATCTGCGGAAGAGTGGTTCTAAACGTATTGGAACCAAAGCAAACTTGGTCATTGCTGCTGCCGCTGGGGCCTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGATTTTGGAAAATCTAAAGGTCTTTTGAAGACCCTTACGGAAGGCACTTGGAATGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCAGCAATTCAGTATACAGTTTTTGATCAACTGAAACAACGAGTCCTGAAGAATCAGCAAAACAGCGTAGACAGGGGATCATCTCCAGCATCCCTCTCTGCATTTATGGCCTTTCTCTTGGGAGCTATTTCAAAGAGTGTTGCTACCGTCTTAACGTATCCCGCTATCAGGTGCAAGGTGATGATCCAAGCTGCGGACAATGAGGAAAAACCAGCCTCAAAATCACAGAAGAAGTCAGGGAAAACAGTCTGCGGAGTTCTCTGTGCAATATGGCAAAGGGAGGGCTTACCGGGTTATTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGCTCAGCTTTGCTTTTGATGATAAAGGAGAAGATCTCTGCCACAACTTGGGTACTTATACTTGCAATTAGAAGGTCACTGTTGGTCCCGAAGGGTAGAATAAAAAACCTATAA	960	0.4573	MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGHQKYRNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLRKSGSKRIGTKANLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWNDAFDGLSISLLLTSNPAIQYTVFDQLKQRVLKNQQNSVDRGSSPASLSAFMAFLLGAISKSVATVLTYPAIRCKVMIQAADNEEKPASKSQKKSGKTVCGVLCAIWQREGLPGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIRRSLLVPKGRIKNL	319

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5095g00030	319	Gene3D	Mitochondrial carrier domain	6	298	IPR023395	-
	Pral5095g00030	319	Pfam	Mitochondrial carrier protein	202	295	IPR018108	-
	Pral5095g00030	319	Pfam	Mitochondrial carrier protein	105	188	IPR018108	-
	Pral5095g00030	319	Pfam	Mitochondrial carrier protein	6	98	IPR018108	-
	Pral5095g00030	319	FunFam	Peroxisomal adenine nucleotide carrier 1	3	298	-	-
	Pral5095g00030	319	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	104	184	IPR018108	-
	Pral5095g00030	319	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	202	297	IPR018108	-
	Pral5095g00030	319	PRINTS	Mitochondrial carrier protein signature	67	85	IPR002067	GO:0055085
	Pral5095g00030	319	PRINTS	Mitochondrial carrier protein signature	113	135	IPR002067	GO:0055085
	Pral5095g00030	319	PRINTS	Mitochondrial carrier protein signature	20	38	IPR002067	GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5095g00030	Pral-Chr5095	101290	104043	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5095g00030	23	313	Chloroplast and Mitochondria Gene Families	AT1G25380	27.922	2.08e-15	74.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5095g00030	-		-	gmx:100787682	525.013

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