Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00030 ATGAGTGTTGATCTGGAATCGTTGGCGGAGGCGACCTCTGGCGCCATAGGATCACTCTTGAGTACGACCATCTTGTACCCGCTTGACACCTGTAAGACCAAGTACCAAGCCGAGGCTCGGGCCCATGGCCACCAAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCGCTTTATCAGGGTCTGGGAACAAAAAACCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGCTACAGCTATTTTAAAAGATTGTATCTGCGGAAGAGTGGTTCTAAACGTATTGGAACCAAAGCAAACTTGGTCATTGCTGCTGCCGCTGGGGCCTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGATTTTGGAAAATCTAAAGGTCTTTTGAAGACCCTTACGGAAGGCACTTGGAATGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCAGCAATTCAGTATACAGTTTTTGATCAACTGAAACAACGAGTCCTGAAGAATCAGCAAAACAGCGTAGACAGGGGATCATCTCCAGCATCCCTCTCTGCATTTATGGCCTTTCTCTTGGGAGCTATTTCAAAGAGTGTTGCTACCGTCTTAACGTATCCCGCTATCAGGTGCAAGGTGATGATCCAAGCTGCGGACAATGAGGAAAAACCAGCCTCAAAATCACAGAAGAAGTCAGGGAAAACAGTCTGCGGAGTTCTCTGTGCAATATGGCAAAGGGAGGGCTTACCGGGTTATTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGCTCAGCTTTGCTTTTGATGATAAAGGAGAAGATCTCTGCCACAACTTGGGTACTTATACTTGCAATTAGAAGGTCACTGTTGGTCCCGAAGGGTAGAATAAAAAACCTATAA 960 0.4573 MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGHQKYRNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLRKSGSKRIGTKANLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWNDAFDGLSISLLLTSNPAIQYTVFDQLKQRVLKNQQNSVDRGSSPASLSAFMAFLLGAISKSVATVLTYPAIRCKVMIQAADNEEKPASKSQKKSGKTVCGVLCAIWQREGLPGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIRRSLLVPKGRIKNL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00030 319 Gene3D Mitochondrial carrier domain 6 298 IPR023395 -
Pral5095g00030 319 Pfam Mitochondrial carrier protein 202 295 IPR018108 -
Pral5095g00030 319 Pfam Mitochondrial carrier protein 105 188 IPR018108 -
Pral5095g00030 319 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Pral5095g00030 319 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Pral5095g00030 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Pral5095g00030 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Pral5095g00030 319 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Pral5095g00030 319 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Pral5095g00030 319 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Pral5095g00030 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 318 IPR045900 GO:0005347|GO:0006635|GO:0015217
Pral5095g00030 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Pral5095g00030 319 SUPERFAMILY Mitochondrial carrier 7 293 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00030 Pral-Chr5095 101290 104043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00030 23 313 Chloroplast and Mitochondria Gene Families AT1G25380 27.922 2.08e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00030 - - gmx:100787682 525.013