Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00008 ATGGATCATCAAGGGCATAACCAGCACCCCTCTATGGATCATCATCAACTGCCTTATGCTTCAAACCCATACCAGGCGACCCAAATAAGTGCGACACCGGGATCCGCTGTCACATCAGTTGGGACCATTCAATACAGTGGTCAGCCTGCGGGAGCTCAACTGGGACAACACCAACTCGCTTATCAGCACATTCACCAGCAGCAGCAGCAGCAACTCCAGCAGCAACTCCAAAACTTTTGGGCTAATCAGTACCAAGAAATCGAGAAGGTGACAGATTTCAAGAATCACAGCCTTCCGTTGGCCAGGATCAAGAAGATCATGAAAGCTGATGAGGATGTTCGCATGATATCAGCGGAGGCGCCGGTGATATTTGCGAGGGCGTGCGAGATGTTTATCCTAGAGCTGACTTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAACGACATTGCAGCAGCAATCACAAGGACTGATATATTTGACTTCTTGGTCGATATTGTGCCGCGTGAGGATCTGAAAGATGAAGTGCTGGCATCAATCCCAAGAGGGACAATGCCTGTGGCAGGGCCTGCTGATGCACTTCCTTATTGTTATATGCCAACTCAGCATGCACCGCAAGTAGGCGCCGCTGGGGTCATAATGGGTAAGCCTGTGATGGACCCGACCATGTATGCCCAACAGTCCCACCCCTACATGCCGCAACAGATGTGGCCACAGCCTCCGGAGCAAAGACAATCTACTCCTGATCGTTAG 771 0.5032 MDHQGHNQHPSMDHHQLPYASNPYQATQISATPGSAVTSVGTIQYSGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQNFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPTQHAPQVGAAGVIMGKPVMDPTMYAQQSHPYMPQQMWPQPPEQRQSTPDR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00008 256 Pfam Core histone H2A/H2B/H3/H4 64 160 IPR007125 GO:0003677
Pral5095g00008 256 SUPERFAMILY Histone-fold 68 169 IPR009072 GO:0046982
Pral5095g00008 256 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 60 198 - -
Pral5095g00008 256 MobiDBLite consensus disorder prediction 237 256 - -
Pral5095g00008 256 Gene3D Histone, subunit A 59 175 IPR009072 GO:0046982
Pral5095g00008 256 FunFam Nuclear transcription factor Y subunit gamma 62 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00008 Pral-Chr5095 58261 60884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00008 1 243 CCAAT-HAP5 Transcription Factor Family AT1G08970 62.295 1.29e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral5095g00008 CBFD_NFYB_HMF 5.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00008 K08066 - gmx:100527803 402.905