Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5095g00003 ATGATGGAAGTTAATACTACAGTCGATACCATCAAGCCTCGTACTGGCATGCACCGCCCCTTGCATCCACAAAACCGTGACCATCATCTCCGTTTCTCCTCCGAAACCATTCTCATTATCATCGTGGCTGTCGCCTCGGGATTGGTGCTCCTGCTTACCATTTTTCTGATCATATTCATGCTTCGTCGGCTGAAATGCTCCCCCAAGAATTCAGCTCTGACTCGTAACAGAAACAACTCAGCGCTTGATGACCCCAGTTGCAGGTTCATGGCTTCGGCCACCATGAACTTGGGTTCTAGTCCAGCTGTGAAGGGAGGGTGTCTTAGTGGTGGGAGTGTGGGCATGAGCAGGGCAGGAGGATGCAGTAAAGAAAGAGGAGTGCAAGTGTTCACGTACAGGGAGCTCCAAGAGGCTACAGAAGGATTCAGCGAAGCAAATGTGATTGGAAGAGGAGGATCTGGTTCCATTTACAGAGGAGTGTTAAGTGATGGCACTCTAGCCGCAATCAAGCTGTTGCGAAGGCAAGGCAGGCAGGGCGAGCGTGCCTTCCGAATTGAGGTGGATATGCTGAGCCGGTTGCACTCTCCATATTTGGTGGAGTTGCTCGGGTACAGTGCGGACCAGCAGCACAGGCTACTGATATTCGAATTCATTCCCAATGGAACGCTGCATCAGCATCTCCACTCTGGAACGAGCCATTCTAAACCCTTGAATTGGTGGACCCGCTTGCGGATAGCCCTTGATTGTGCCAGAGCTCTTGAATTCCTGCATGAGCATGCGGTCCCGCCGGTGATGCATCGTGACTTCAACTCCCACAACGTTCTGCTGGATCACAACTTTCGGGCCAAGATCAACGCTCAGATTTCCACCCCCGCTTTAGGGACCACCGGATATCTGGCTCCAGAGCATGCGTGTTCAGGGGAGCTCACCACAAAGTCGGATGTGTACAGCTACGGGGTGGTTCTCTTGGAGTTGCTCACTGGACGTGTGCCGGTTGATATCAAACGACCTCCCGGAGAACATGTTCTCGTCTCTTGGGCTCTTCCAAGGTTAACGAACAGAGAAAAGCTGGTGGGAATGGTTGACCCAGTTCTGCGCGGACACTACTCGGAGAAGGATCTAATTCAGATAGGTGCAATTGCAGCCATGTGCGCACAGCCAGAAGCAGATTACAGACCGCTTATGACAGACGTGGTGCAGTCCCTAATACCACTTGTCAGGAACACAAGTGCAGCTTCATTTAGTTCCCCAAAACTTCGCAGACAAACATCGAGTCCAGTCCATTAG 1287 0.5183 MMEVNTTVDTIKPRTGMHRPLHPQNRDHHLRFSSETILIIIVAVASGLVLLLTIFLIIFMLRRLKCSPKNSALTRNRNNSALDDPSCRFMASATMNLGSSPAVKGGCLSGGSVGMSRAGGCSKERGVQVFTYRELQEATEGFSEANVIGRGGSGSIYRGVLSDGTLAAIKLLRRQGRQGERAFRIEVDMLSRLHSPYLVELLGYSADQQHRLLIFEFIPNGTLHQHLHSGTSHSKPLNWWTRLRIALDCARALEFLHEHAVPPVMHRDFNSHNVLLDHNFRAKINAQISTPALGTTGYLAPEHACSGELTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKLVGMVDPVLRGHYSEKDLIQIGAIAAMCAQPEADYRPLMTDVVQSLIPLVRNTSAASFSSPKLRRQTSSPVH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5095g00003 428 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 218 416 - -
Pral5095g00003 428 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Pral5095g00003 428 Pfam Protein kinase domain 143 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5095g00003 428 SUPERFAMILY Protein kinase-like (PK-like) 125 402 IPR011009 -
Pral5095g00003 428 ProSiteProfiles Protein kinase domain profile. 142 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5095g00003 428 Gene3D Transferase(Phosphotransferase) domain 1 218 418 - -
Pral5095g00003 428 MobiDBLite consensus disorder prediction 1 26 - -
Pral5095g00003 428 Gene3D Phosphorylase Kinase; domain 1 118 217 - -
Pral5095g00003 428 PANTHER OS07G0668900 PROTEIN 122 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5095g00003 Pral-Chr5095 30507 33266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5095g00003 119 426 Receptor kinase-like Gene Family AT3G58690 56.287 1.07e-129 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral5095g00003 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5095g00003 - - pcin:129299908 547.74