Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5094g00012 ATGGCTCTTCTTGAAGCCACTCCTGCTTTCTTCCCACTTCCACTTTCCACATCATATCTCAACACCAGCACCGTTATCGCTCTCTGTGTCTTCTTCGCACTTCTCTGCGCTTGCATCGTTATCGGTCACCTTCTCGAAGAGAACCGCTGGGCCAATGAATCCATCACTGCCCTCCTTCTGGGCCTGTGTTCTGGAGCGGTGGTCTTGCTGGTGACCAAGTTCAGTAATACTGAATTTTTCAAATTCAGCGAAGACTTGTTCTTTCTTTACTTGCTTCCTCCTATCATTTTTAATGCCGGTTTCCAAGTGAAGAAGAAGCAGTTCTTCAAGAATTTTTCAAGTATTCTGCTGTTTGGAGTCATTGGAACTGTTATTTCGTTCTGCTTCATATCAGCTGGTGCCTTTTTTCTGCTCAGGAAGATAGGTCTAAGCTTGAATATTCAAGATTATCTAGCCATTGGTGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCATTGTATTTGGGGAGGGAGTTGTAAATGACGCAACCTCCATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATCAGTGCCACTACAGCCCTGAAATTGTTGGGGACATTCCTTTACCTCTTCCTCACTAGCACTGTCCTTGGTATATCAGTTGGCCTTTTGAGTGCTTTTACTATTAAAACACTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTCGCACTCATGATGCTTATGGCTTATTTATCATACATGATTGCTGAGCTTTTGAGTCTCAGTGGGATTTTGACAATCTTCTTTTGTGGCATTGTCATGTCACACTACACGTGGCACAACGTTACAGAAAGCTCGAGGATAACTACCAAGCATGCTTTTGCAACTCTCTCATTCATCGCCGAAACTTTTATATTTCTATATGTTGGCATGGATGCCTTGAATCTTGAAAAATGGAAAACCAGCAACGCAAGCTTGGGGACTTCAATTGCTGTTAGTTCAGCTTTCTTGGCGTTAGTGTTGATTGGTAGGGCAGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGCATCGAGAGACAAGAAAGTTCCAAAATCAAGTTCCGATCGCAGGCTTATTGA 1161 0.4246 MALLEATPAFFPLPLSTSYLNTSTVIALCVFFALLCACIVIGHLLEENRWANESITALLLGLCSGAVVLLVTKFSNTEFFKFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFSSILLFGVIGTVISFCFISAGAFFLLRKIGLSLNIQDYLAIGAIFSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLYNSVQSLDFSSISATTALKLLGTFLYLFLTSTVLGISVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATLSFIAETFIFLYVGMDALNLEKWKTSNASLGTSIAVSSAFLALVLIGRAAFVFPISNIKNCIERQESSKIKFRSQAY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5094g00012 386 Pfam Sodium/hydrogen exchanger family 29 368 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral5094g00012 386 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00012 386 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00012 386 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00012 386 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00012 386 Gene3D - 146 198 - -
Pral5094g00012 386 PANTHER SODIUM/HYDROGEN EXCHANGER 23 384 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5094g00012 Pral-Chr5094 36258 41846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5094g00012 15 384 Antiporters AT3G05030 67.385 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5094g00012 K14724 - cave:132171457 568.926