Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5094g00010 ATGGCTCTTCTTGAAGCCACTCCTGCTTTCTTCCCACTTCCACTTTCCACATCATATCTCAACACCAGCACCGTTATCGCTCTCTGTGTCTTCTTCGCACTTCTCTGCGCTTGCATCGTTATCGGTCACCTTCTCGAAGAGAACCGCTGGGCCAATGAATCCATCACTGCCCTCCTTCTGGGCCTGTGTTCTGGAGCGGTGGTCTTGCTGGTGACCAAGTTCAGTAATACTGAATTTTTCAAATTCAGCGAAGACTTGTTCTTTCTTTACTTGCTTCCTCCTATCATTTTTAATGCCGGTTTCCAAGTGAAGAAGAAGCAGTTCTTCAAGAATTTTTCAAGTATTCTGCTGTTTGGAGTCATTGGAACTGTTATTTCGTTCTGCTTCATATCAGCTGGTGCCTTTTTTCTGCTCAGGAAGATAGGTCTAAGCTTGAATATTCAAGATTATCTAGCCATTGGTGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCATTGTATTTGGGGAGGGAGTTGTAAATGACGCAACCTCCATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATCAGTGCCACTACAGCCCTGAAATTGTTGGGGACATTCCTTTACCTCTTCCTCACTAGCACTGTCCTTGGTATATCAGTTGGCCTTTTGAGTGCTTTTACTATTAAAACACTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTCGCACTCATGATGCTTATGGCTTATTTATCATACATGATTGCTGAGCTTTTGAGTCTCAGTGGGATTTTGACAATCTTCTTTTGTGGCATTGTCATGTCACACTACACGTGGCACAACGTTACAGAAAGCTCGAGGATAACTACCAAGCATGCTTTTGCAACTCTCTCATTCATCGCCGAAACTTTTATATTTCTATATGTTGGCATGGATGCCTTGAATCTTGAAAAATGGAAAACCAGCAACGCAAGCTTGGGGACTTCAATTGCTGTTAGTTCAGCTTTCTTGGCGTTAGTGTTGATTGGTAGGGCAGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGCATCGAGAGACAAGAAAGTTCCAAAATCAAGTTCCGATCGCAGTTTATAATATGGTGGGCAGGCTTATTGAGAGGTGCAGTGACTATTGCCTTGTGCTATTACCAGTTTGAAAAGGCGAGATTGTCAGCTCAAGAAAGTGCAGTGGTGATCACCTCCACCATAACCGTCGTATTATTCAGTACTATGGTGTTTGGTTCCATAACAAAGCCCTTGATTCAGGCGGTGCAGCTGAGGCATTCAAAACCAGCGATTTCTGAGTCCACTGAAAATACGGAGGATTTCAGATTCTTACTCCTTGAAAATGTTGGTCCCAGTGACCAGGGCAATAATCAGCCAGGCCGGAGGAGAGGCAGCCTAAGTTTACTGATAAGTAATCCCACGTCAACGGTTCACTACTTTTGGAGGAAATTTGACGATAAATATATGAGGCCAATATTTGGTGGGAGGGGTTTTGTTCCATTTGTTCCTGTTTCTCCTTCTTCCGATTCTAATGAACCGCCGGACGCTCCCCCAGCTCCAGACAATGCAGCTACTTAG 1647 0.4347 MALLEATPAFFPLPLSTSYLNTSTVIALCVFFALLCACIVIGHLLEENRWANESITALLLGLCSGAVVLLVTKFSNTEFFKFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFSSILLFGVIGTVISFCFISAGAFFLLRKIGLSLNIQDYLAIGAIFSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLYNSVQSLDFSSISATTALKLLGTFLYLFLTSTVLGISVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATLSFIAETFIFLYVGMDALNLEKWKTSNASLGTSIAVSSAFLALVLIGRAAFVFPISNIKNCIERQESSKIKFRSQFIIWWAGLLRGAVTIALCYYQFEKARLSAQESAVVITSTITVVLFSTMVFGSITKPLIQAVQLRHSKPAISESTENTEDFRFLLLENVGPSDQGNNQPGRRRGSLSLLISNPTSTVHYFWRKFDDKYMRPIFGGRGFVPFVPVSPSSDSNEPPDAPPAPDNAAT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5094g00010 548 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral5094g00010 548 PANTHER SODIUM/HYDROGEN EXCHANGER 23 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral5094g00010 548 MobiDBLite consensus disorder prediction 527 548 - -
Pral5094g00010 548 Gene3D - 146 198 - -
Pral5094g00010 548 MobiDBLite consensus disorder prediction 533 548 - -
Pral5094g00010 548 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00010 548 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00010 548 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00010 548 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5094g00010 548 NCBIfam sodium/hydrogen exchanger 3 28 460 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5094g00010 Pral-Chr5094 36258 42755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5094g00010 15 540 Antiporters AT3G05030 60.821 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5094g00010 K14724 - qsa:O6P43_026859 746.117