Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00026 ATGGGGTGCGTGATTAGTCGAGAAGTCTCGTCTGAAATAACTTCAGAGGTGAAAGAGGAGAGGAATTTGAGTGCTCAACCGAACGGGAAGATAGATGAGAGCACCACGGGGACAGCTGAGGGAGAAGTGGTTGAGGTTCAGAACGTTGGCAACCGAAAGGAAGAGAAAGATGGTGATGATGGGGCCCAGGTTGAGCAGCCCCGCAGCAGAAGGAGAAGGTCAAAGCCAAACCCAAGGCTAAGTAACCCTCCAAAGCATTTGCGGGGGGAGCAAGTAGCAGCTGGGTGGCCCCCCTGGCTTACGGCAGTGTGTGGAGAAGCACTTAATGGGTGGATTCCTCGGAAGGCTGACACATTTGAGAAAATTGATAAGATTGGGCAAGGAACGTATAGCAATGTGTACAAAGCTAAAGACATGTTGACTGGTAAAATTGTTGCATTAAAGAAGGTTCGATTTGATAATTTGGAGCATGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATTTTGCGGCGATTGGATCATCCCAATGTTGTAAAATTGGAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTGGTGTTTAATTACATGGAGCATGATTTGGCTGGACTTACTGCAAGCCCAGGAACCAAGTTCACTGAGCCTCAGGTCAAATGTTACATGCACCAACTATTATCAGGACTCGAGCACTGTCATAACCTTCGAGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATAGCTGACTTTGGATTGGCTTCTTTCTTCGATCCTAACCGGAAGCTGCCAATGACTAATCGTGTAGTTACACTTTGGTATCGACCTCTTGAGTTGCTTCTTGGTGCCACAGAATATGGTGTGGGAGTGGATCTTTGGAGTGCAGGTTGCATTTTGGGAGAGTTATTGGCAGGAAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAGCTGCATAAGATATACAAACTATGTGGTTCGCCCTCAGATGAGTACTGGAAGAGGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCTTACAAGAGATGCATACGAGAGACTTTTAAAGATTTTCCACCTTCTGCACTTACACTTATGGATAATCTTCTTGCGCTTGATCCAGCAGAACGGAAGACTGCATCAGATGCCCTAAGAAGTGAGTTCTTCACCACAGAACCTTATGCCTGTGATCCTTCTAGTCTTCCCAAATATCCACCAAGCAAGGAAATGGACGCTAAACGACGAGATGATGAAGCAAGGAGACAACGAGCTGCAGGCAGAGGTCAGGTTGATGGCTCAAAGAAACTCCGAACACGTAATCGAGCTAAACCTAATCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATAGAAGGCGTCTAATAACTCGTGCAAATGCGACGAGCAAGAGTGAGAAGTTCCCACCACCTCATCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCACGTCACATTGATTCAAATGTCGTTCCTCCTGATGTCTCTTTCAGTTCAACTTCATTTACCTATTCAAAAGAACCATTCCAAGCTTGGTCAGGCCCCATTGCGGCGCCCAAGCAGAAGAAACACGCTTATCCTGGTGATGCGGTGGATTTATCAAAACAACGTACAAATGCCCTCAAGGATAAACGTTAA 1707 0.454 MGCVISREVSSEITSEVKEERNLSAQPNGKIDESTTGTAEGEVVEVQNVGNRKEEKDGDDGAQVEQPRSRRRRSKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEHESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFNYMEHDLAGLTASPGTKFTEPQVKCYMHQLLSGLEHCHNLRVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRKLPMTNRVVTLWYRPLELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKRSKLPNATLFKPREPYKRCIRETFKDFPPSALTLMDNLLALDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRQRAAGRGQVDGSKKLRTRNRAKPNPAPEANAELQSNIDRRRLITRANATSKSEKFPPPHQDGQLGFPLGSSRHIDSNVVPPDVSFSSTSFTYSKEPFQAWSGPIAAPKQKKHAYPGDAVDLSKQRTNALKDKR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00026 568 MobiDBLite consensus disorder prediction 538 568 - -
Pral5093g00026 568 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Pral5093g00026 568 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5093g00026 568 MobiDBLite consensus disorder prediction 421 452 - -
Pral5093g00026 568 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Pral5093g00026 568 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5093g00026 568 Gene3D Transferase(Phosphotransferase) domain 1 202 442 - -
Pral5093g00026 568 MobiDBLite consensus disorder prediction 409 508 - -
Pral5093g00026 568 MobiDBLite consensus disorder prediction 1 91 - -
Pral5093g00026 568 CDD STKc_CDK9_like 119 403 - -
Pral5093g00026 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pral5093g00026 568 MobiDBLite consensus disorder prediction 47 71 - -
Pral5093g00026 568 MobiDBLite consensus disorder prediction 548 568 - -
Pral5093g00026 568 MobiDBLite consensus disorder prediction 12 26 - -
Pral5093g00026 568 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5093g00026 568 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pral5093g00026 568 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Pral5093g00026 568 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Pral5093g00026 568 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00026 Pral-Chr5093 125408 130899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00026 111 443 Core Cell Cycle Gene Families AT5G10270 52.149 1.04e-120 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral5093g00026 Pkinase 6.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00026 K08819 - gmx:100817289 894.804