Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00015 ATGTTCACTTCTGGTGAAGAGCAGATTCTGTTCCATTCAGAGCATGCATCAGAAAATGTCACTGAGGCTTTTAAAACAACTTCCTGGAATTTAAATCCAGATTCCATTAATGGGTCCCTATCAGCTGCTGAATTCCCCGATTCGCCTCCAGTTTCTACCATTTACACTGATGTTGGCGTCATTCCCGAACACGAAAAGAACGAGCTAGAGCAATTGATGTCAAATCTAGAAAGAGAAGTTAAGCAGCTGAGGAACGAACAGTGCGTATTTGACAAAAAGCGGAGAGAAGCACTGAGTAAGATATTGGACATTAAAGGCAGCATTCGAGTATTCTGTAGAGTTCGACCCTTTTTATTGGCAGAGGGGAGAATAACCTCCGAGCCAGTTTCTGCTGCGTCAGAAAGGATTCGGGTTAAAATGGGAGGAGCGAAGAAAGACTTTGAATTTGATAAGGTTTTCCCTCAAGAAGCAAACCAAGAAAGTGTTTTTATCGAGGTCGAACCCATTCTCCGATCTGCAATGGACGGACACAATGTGTGCGTTTTAGCTTACGGACAAACGGGCACTGGCAAGACATTCACAATGAATGGTACAAACGAGCAGCCAGGAATTATTCCCCGTGCTCTTGAAGAGTTATTTCGTCGAGCCTCTCTAGAGAATTCATCATCTTTTACATTTTCAATGAGCATGTTAGAAGTTTACATGGGTAGTCTTAGAGATCTGCTGGCTCCGAGACCATGCACTAAAGCCTATGAACCTGTAATAAGATGCAATCTTAACATTCAAACGGATCCTAAGGGATTAGTCGAAATTGAGGGTCTCTCAGAAGTGCAAATCTCAGATTCTGCTAAAGCCAGATGGTGGTACAACAAAGGTAGGAGGGCCAGATCCACTTCATGGACTCATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATCACCATATTCCGTCGTGGACACGGTCTGGAAGGCAAAAGAGAAATAAGCAAATTGTGGATGGTTGATCTCGGAGGAAGCGAGCGGTTACTGAAAACTGGAGCCGTAGGACTCACGCTTAATGAGGGCAGAGCCATTAATCTTTCTCTTTCAGCTTTAGCTGATGTTATTGCAGCTTTGAGGAGGAAGAGGAGCCATGTGCCTTATAGAAATAGCAAGCTAACTCAAATACTCAAAGATTCTTTAGGTAATGGTTCAAAGGTCTTGATGCTTGTGCACATAAGCCCCTACGAAGAAGATGTTTGTGAGACAATGTGTTCTTTGAACTTTGCAAAGAGGGCAAGAGCAACGGAGTCCAACAAAGAAATACCAGAGGAACTGAGAAAGCAAAAGGAGAAGAAGATTCTGGAGCTCGAGGAAGAGATGAGGGAAGCCGAGAAGGAACACCAGAAACTAAGGGATCAGATTCAGAAGGCTGAGTTAAAGTTAGAGGAACAGAAAAAGGTCTTCTCAACTACATACAAGCTTCTGGAAAACGATGACAGTGCCCCTATAAGCCCTAAAAATAATGCGAAAGAGGTCACTGAAACCCCAAAAGCATCTAAGAAATATATTAAAAGCACTATATCGAATTCTATGCCTCGATTCATGACTTCCACTGTTGCCAGTCGCCAGAGGCAAAGTGCGTCGGAAAGAGAAATAGTTGGACGATCAAGAAGTTTAAGATCAGCGATCACAAGAGGTTCCCTCCAGTTTTCAGGTTCCCAATCACTGAATTGCTCGGATCTCCGATTGAAAGCGGTAATACAAAATTCAACTGGAAAATCTCGGCTTGGTGAAACCACGGAGAGTCCTAAATGCAACGGTTTGGAATCAAAAACCACCAATCCTGGAACCAGAATGTTCACTTCATCGGATCCTAACGTGGTCGTTACTTTACGTCGTCATAGAAGACGAATGTCCGATCTGAACTGA 1920 0.4354 MFTSGEEQILFHSEHASENVTEAFKTTSWNLNPDSINGSLSAAEFPDSPPVSTIYTDVGVIPEHEKNELEQLMSNLEREVKQLRNEQCVFDKKRREALSKILDIKGSIRVFCRVRPFLLAEGRITSEPVSAASERIRVKMGGAKKDFEFDKVFPQEANQESVFIEVEPILRSAMDGHNVCVLAYGQTGTGKTFTMNGTNEQPGIIPRALEELFRRASLENSSSFTFSMSMLEVYMGSLRDLLAPRPCTKAYEPVIRCNLNIQTDPKGLVEIEGLSEVQISDSAKARWWYNKGRRARSTSWTHVNEASSRSHCLTRITIFRRGHGLEGKREISKLWMVDLGGSERLLKTGAVGLTLNEGRAINLSLSALADVIAALRRKRSHVPYRNSKLTQILKDSLGNGSKVLMLVHISPYEEDVCETMCSLNFAKRARATESNKEIPEELRKQKEKKILELEEEMREAEKEHQKLRDQIQKAELKLEEQKKVFSTTYKLLENDDSAPISPKNNAKEVTETPKASKKYIKSTISNSMPRFMTSTVASRQRQSASEREIVGRSRSLRSAITRGSLQFSGSQSLNCSDLRLKAVIQNSTGKSRLGETTESPKCNGLESKTTNPGTRMFTSSDPNVVVTLRRHRRRMSDLN 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00015 639 Coils Coil 66 89 - -
Pral5093g00015 639 MobiDBLite consensus disorder prediction 494 509 - -
Pral5093g00015 639 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 61 434 - -
Pral5093g00015 639 MobiDBLite consensus disorder prediction 590 620 - -
Pral5093g00015 639 PRINTS Kinesin heavy chain signature 176 197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 564 IPR027640 GO:0003777|GO:0007018
Pral5093g00015 639 SMART kinesin_4 105 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 Gene3D Kinesin motor domain 102 481 IPR036961 -
Pral5093g00015 639 MobiDBLite consensus disorder prediction 494 517 - -
Pral5093g00015 639 ProSiteProfiles Kinesin motor domain profile. 107 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 Coils Coil 443 484 - -
Pral5093g00015 639 Pfam Kinesin motor domain 131 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5093g00015 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 472 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00015 Pral-Chr5093 81846 85770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00015 79 430 Calmodulin-binding Proteins AT5G65930 39.106 9.04e-68 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00015 - - gmx:100785581 843.573