Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00012 ATGCAGCGGAAGAAGGTGAGAACTGAAATGAAGAATATTTTCAAGAAGCTTCACATTGGGAGCAATCACGATCCTAATCGACCCCATGAAACTCCTCCCTCTTCCTCCTCCTCCTCCGCAGTGACCTCACAATCTGGCGCCTCCGATCCCCGTACAACTCCTGTTCAGAATTCCGGTACCCCTCTGCCTAGCCCTTCTTCTTCTTCACCATCGCCTTCCCCTGCTCCTCCACCAGCTGGCGGCGCTTCCTCTCCCCAACCTGCCAAGTCCAATTTTGACTATTTCTCGTCGGAGGAGGAGTTCCAGGTTCAGTTAGCTCTAGCCATCAGTGCTTCCAATTCGGAGTTCCGGAATGATCCTGAGAAGGATCAGACCCGAGCGGCAACGGTACTGAGCTTAGGAGGTCATCGAACGCATTGCACAACGAATAAGGATCACGAAGCGGAGGCACTCTCTAGGCAGTACTGGGAATACAATGTTCTTGACTACGAGGAGAGAGTAGCAGATGGTTTTTATGATGTATACAGCCTCTGTAACGATGCTGCAATGCAGGAGAAAATGCCATCTCTGGCTGAACTTGAAGGAAACCCTGGAAGTTCTAACTTTGAAATTGTCATGGTTAATAGAAAGATTGATCATGTATTGGAAGAGCTGTTGCAAATTGCCCATTGCATTGCATTAGACTGCCCAGTCACCAAGGTTGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGGCATATGGGTGGTCCTGTAAAGGATGCTAATATTGCATTGACGAAATGGATGGAAAGAAGTACGGATCTAAGAACATCCCTTCACACTAGTGTGTTGCCTCTTGGGTTCATAAATATGGGGCTATCCAGGCATCGGGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGCAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGTTGGATGATGAAAGGGAATTTTTGGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCTGCTGACTTAAGTGCAAAGGATACTGCCTCTAAGCCATGCAACCCCAAGATCTTGCCAAGATTACAATCCAGTAAAGAAAGTGGATCTTCTTGCTCAAGGAAAACATCATCCGATGGTGAAGGAAGTAGTCAAATTTCTGTGAAAAGAGATGATTCATCACCATTGACTGGAAAATTATCTTTTGAGAAGTCAGACATGTCTTCAAAAATGAGCTCAAGCAAAGATGCTGGTGCTATTGCTTCCAAAATGCTAGACAGAGCAACTTCCAGCCAACCAGAAAAATTGCCCCCCTCTGCTGGCACTTTGCTATATAGTTACAAGGGGACTCTTGGAATGAATGCAATTGGTGATGGGACAAGACTGAATGCCAATATTGTACCCTATGGTCAGGACAGCCTAGACAACTCAAGGAGCCTTTTTGCGGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCTCTGTACACAACAAGCCTATGGAAAATAAGTCTCCTGAGCTTCAAATTACAAGAGACAATTCTGTCTCTGGCCAACCCTCTGTACCATTGATGTGGAAGAATCGTTATGCTTACAATGACATTCCCAAAAAAATTAACCGTGATCCTAGTGAATATAATTCCCAGTCATCACATAATTCTAATTCTGTTATAAATAAAGATAGAAACACCCTCAATTTGATGGAAGTCACTGGTTCATCGTTGGCACCTGGTGCAGGTGAGCTGAACAGGGCTGAGGGTCTCAAAGAGGACTGTAACAGAAGGAATGGGGAAAGCTTCGAAAATGAAATGATAGATGTGGCTAAAGAACATGAGAACAATGAAATTAAGTTTCATGACCGGAGAAAGTGCACATATGACAGATTCACGGGGAGCAATTTGAAATTAAAGGCCTCAGAGCGTCCTAGCTCATCAATTGAATCCATTGCTATTGGGGCTGATCAAATATTGGATGACGCAGATGTTGGTGAATGTGAAATTCCATGGGAGGATTTGATTATTGGTGAAAGAATAGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGATGTTGCAGTGAAGAAGTTTCTGGATCAGGACTTTTCAGGCGCTGCATTGGCCGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTACGTCATCCGAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCTAATCTCTCAATCATTTCAGAGTTTCTTCCGAGAGAAAGCTTGTACAAAATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAACGTAGGATAAAGATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTACACACCAGCACACCTACTATTGTTCACAGAGATCTGAAGTCACCGAATCTTTTGGTTGACAATAACTGGAATATCAAGGTTTGTGATTTTGGGTTATCACGCTTGAAGCACAACACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAACGAGCCCTCAAATGAGAAGTGTGACGTTTATAGCTTTGGAATCATCCTGTGGGAGCTTGCCACTTTAAGGTTGCCATGGAGCGGAATGAACCCTATGCAGGTTGTTGGTGCAGTTGGTTTCCAAAATCGTCGCCTGGAAATCCCCAAAGAAATTGATCCTGTTGTTGCAAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCATTTGCGCAGCTCACTGTGATTTTGAAGTCCTTGCAGCGTTTAGTTATTCCATCTTATCAAGATCAGATGGCTTCACCTCTGCCACAGGAGATTTCTGTAAATTCCACCCCTTAG 2883 0.4422 MQRKKVRTEMKNIFKKLHIGSNHDPNRPHETPPSSSSSSAVTSQSGASDPRTTPVQNSGTPLPSPSSSSPSPSPAPPPAGGASSPQPAKSNFDYFSSEEEFQVQLALAISASNSEFRNDPEKDQTRAATVLSLGGHRTHCTTNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCNDAAMQEKMPSLAELEGNPGSSNFEIVMVNRKIDHVLEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIALTKWMERSTDLRTSLHTSVLPLGFINMGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKDTASKPCNPKILPRLQSSKESGSSCSRKTSSDGEGSSQISVKRDDSSPLTGKLSFEKSDMSSKMSSSKDAGAIASKMLDRATSSQPEKLPPSAGTLLYSYKGTLGMNAIGDGTRLNANIVPYGQDSLDNSRSLFADLNPFQIKGTGKTSVHNKPMENKSPELQITRDNSVSGQPSVPLMWKNRYAYNDIPKKINRDPSEYNSQSSHNSNSVINKDRNTLNLMEVTGSSLAPGAGELNRAEGLKEDCNRRNGESFENEMIDVAKEHENNEIKFHDRRKCTYDRFTGSNLKLKASERPSSSIESIAIGADQILDDADVGECEIPWEDLIIGERIGLGSYGEVFRADWNGTDVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRESLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNIKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEIDPVVARIIWECWQQDPNLRPSFAQLTVILKSLQRLVIPSYQDQMASPLPQEISVNSTP 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00012 960 Gene3D Phosphorylase Kinase; domain 1 672 756 - -
Pral5093g00012 960 CDD STKc_MAP3K-like 685 931 - -
Pral5093g00012 960 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 934 - -
Pral5093g00012 960 SUPERFAMILY Protein kinase-like (PK-like) 670 952 IPR011009 -
Pral5093g00012 960 PRINTS Tyrosine kinase catalytic domain signature 792 810 IPR001245 GO:0004672|GO:0006468
Pral5093g00012 960 PRINTS Tyrosine kinase catalytic domain signature 839 849 IPR001245 GO:0004672|GO:0006468
Pral5093g00012 960 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Pral5093g00012 960 PRINTS Tyrosine kinase catalytic domain signature 902 924 IPR001245 GO:0004672|GO:0006468
Pral5093g00012 960 Pfam Ethylene-responsive protein kinase Le-CTR1 148 346 - -
Pral5093g00012 960 Gene3D Transferase(Phosphotransferase) domain 1 759 940 - -
Pral5093g00012 960 ProSiteProfiles Protein kinase domain profile. 679 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5093g00012 960 MobiDBLite consensus disorder prediction 27 64 - -
Pral5093g00012 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Pral5093g00012 960 SMART serkin_6 679 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5093g00012 960 MobiDBLite consensus disorder prediction 65 83 - -
Pral5093g00012 960 MobiDBLite consensus disorder prediction 367 422 - -
Pral5093g00012 960 MobiDBLite consensus disorder prediction 1 92 - -
Pral5093g00012 960 FunFam PAS domain-containing protein tyrosine kinase family protein 757 948 - -
Pral5093g00012 960 MobiDBLite consensus disorder prediction 352 424 - -
Pral5093g00012 960 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Pral5093g00012 960 FunFam Serine/threonine-protein kinase isoform 1 670 757 - -
Pral5093g00012 960 Pfam Protein tyrosine and serine/threonine kinase 680 929 IPR001245 GO:0004672|GO:0006468
Pral5093g00012 960 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00012 Pral-Chr5093 72475 80075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00012 10 915 MAP Kinase Kinase Kinase AT1G08720 55.294 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral5093g00012 PK_Tyr_Ser-Thr 1.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00012 - - pcin:129307411 1594.71