Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00006 ATGATTGTGCCGACTTCCTCTCGTCTCAATTTTACTGTAAGGAGGCACCAACCAGAGCTTGTAGGTCCAGCAAAGCCTACTCCTCGTGAGTTAAAGCTACTGTCTGACTTGGACGACCAAGACAGCTTACGCGCCCATGTTCCACTGGTACATTTCTACCGTCACGAGGCTTCAATGGCGGGGAAGGACCCCGTCAAAGTCATCAGAGACGCATTAGCTCAGACACTGGTATTTTACTACCCCTTTGCAGGTAGGCTCAGGGAAGGTGTTGGCCGCAAACTCTTTGTCGAGTGTAATGGAAAAGGCGTTCTTTTTATTGAAGCTGATGCAGATGTAACCCTTGCTCAGTTTGGTGACAATCTTAAACCTCCATTTCCATGCTTCAATGACCTCCTTTACAATGTTCCTGGTTCTGAAGGAATCCTTCATTGTCCCCTCTTACTTATACAGGTAACACGTCTCAGGTGTGGAGGTTTTGTATTCGCCGTTCGCATGAATCACACCGTGACCGACGGACCAGGTATTTTCCAGTTCATGAATGCTCTGGCTGAAATAGCTAACGGGGAAAGTGAACCCTCCATTCTTCCTGTCTGGCACAGAGAGATCCTAAGTGCAAGGAACCCGCCACGTGTTACTTGCACCCATCATGAGTTCGAGGAAGTGGCTGGCGCCACCATTCCCTTAACAGACATAGCCCATCAATCTTTCTTCTTTGGGCCAACTGAGATATCTGCCATTCGACGTCTCACTCCTCGTCACCTTAGGCAATCTACAACATTTGAGGTCCTCACAGCTTGTCTCTGGCGTTGCCGCACTAAGGCTCTGCAGCTAGATCCAGACGATGATGTTCGCGCGTTGCTCATCGTAAATGCACGTTATGGCCGAGGTAGGTTTAACCCTCCAATACCTACTGGTTATTATGGTAATGCCTTTGTGTATCCAGCTGCAGTTGCCACTGCGGGGAAACTTTGTGAGAGTCCATTGGGATATGCCTTGGAGTTAGTGAAAAAAGCCAAGGCTGAAGTGAATGAAGAGTATGTGCACTCCATGGCTGATCTTTTGGTGACAAGAGGACGACCTTGTTTTACATCAGAGAGATCGTGGATGATATCAGACTTGTCGCGTGTTGGCTTTAGAAATGTTAATTTTGGGTGGGGCAAGGCTGTGTATGCTGGTCTGGCTGAGGCTGGCCTTGGGCCACTTCCTGGAGTGAGTTTCTCTGTTGGATCTACCAATAATAAAGGAGAGGATGGCAGAGTTGTTCTTATGTGCTTGCCACCCAAGGCTATGAACAGGTTTGCCAGAGAGTTGGACAACATGCTTGGCAGTTATAAGAACAGTAGTCAAGATCCCAGCATCATCATGTCTCACTTGTAG 1377 0.4815 MIVPTSSRLNFTVRRHQPELVGPAKPTPRELKLLSDLDDQDSLRAHVPLVHFYRHEASMAGKDPVKVIRDALAQTLVFYYPFAGRLREGVGRKLFVECNGKGVLFIEADADVTLAQFGDNLKPPFPCFNDLLYNVPGSEGILHCPLLLIQVTRLRCGGFVFAVRMNHTVTDGPGIFQFMNALAEIANGESEPSILPVWHREILSARNPPRVTCTHHEFEEVAGATIPLTDIAHQSFFFGPTEISAIRRLTPRHLRQSTTFEVLTACLWRCRTKALQLDPDDDVRALLIVNARYGRGRFNPPIPTGYYGNAFVYPAAVATAGKLCESPLGYALELVKKAKAEVNEEYVHSMADLLVTRGRPCFTSERSWMISDLSRVGFRNVNFGWGKAVYAGLAEAGLGPLPGVSFSVGSTNNKGEDGRVVLMCLPPKAMNRFARELDNMLGSYKNSSQDPSIIMSHL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00006 458 PANTHER ACYL TRANSFERASE 4 11 441 - -
Pral5093g00006 458 Gene3D - 8 220 IPR023213 -
Pral5093g00006 458 Gene3D - 222 437 IPR023213 -
Pral5093g00006 458 Pfam Transferase family 15 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00006 Pral-Chr5093 40204 41653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00006 44 437 Monolignol Biosynthesis Gene Families AT5G48930 31.010 1.62e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00006 K19861 - aew:130753486 591.652