Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00005 ATGGCTCAACCGTCTGTTTCGGATCTAATGTTTACGGTGAGGAGACGCCAACCAGAGCTAATTACTCCCGCCAAGTCCACCCCCCATGAATTTAAGCTACTTTCCGACATAGATGACCAGGATGGTCTTCGATGTCGAATTCCAGCGGCATTCTTTTATCCTTACGAACAATCCATGCAAGGAAAGGACCCCGCCCAACTTATCAGAAAGGCGCTTGCTCAAGCCCTAGTCTTTTACTATCCACTCGCAGGTCGGCTTAGGGAAGGTCCTGGCCGCAAACTTATGGTAGATTGTAACGAGGAAGGGGTCGTCTTCATTGAAGCTGACGCAGATGTCACCATTCACCAATTCGGCGACCCTATTCAACCTCCATTTCCATGCTTTGAAGAGCTCCTTTATAATGTTCCAGGCTTGGAAGGAATCATTAATTGTCCTCCCTTAGTTGTTCAGGTTACACGTCTCAAGTGCGGTGGTTTCGTTTTAGCCTACTTCTTCAACCACACCATGTGGGATGGTCATGGTATAGCTCAATTCTTTGGAGCCTTAGCGGAGATTGCCAGGAGTGCTAGTGAGCCTTCAGTTACCCCAGTTTGGTGTAGAGAGCTACTAAACGCAAGGGACCCACCTCGCGTTACATGCACCCATCATGAGTACACGGAAGTGCCTGATGATACAGAAGCAAAAATGCCGGAAGCTATGGTCCAAAGCTCTTTCTTCTTTGGACCTGACAAGTTAAAGGCCATCCGTCAACTGTTTTCTGAATACCATGGTCAATACACTGTGTTTGAGGCGTTCACAGCATTCCTCTGGCGCTGTCGCACCATATCATTACAGCTAGAACCAGACCAGGAGATTCGCCTAATGTGCATTAGCAATGTTAGAGGCAAAACAAACCCGCCACTGTTGCCGATTGGCTATTACGGTAATGGCTTTGTGTACCCCGCCGCTGTTACCACTGCGAATAAGCTTACGAGAAGTCCACTTGTGTATGCCCTAGAGTTGGTCAAAAAGGCGAAAGGTGAGGCAACGGTAGAGTATATACGATCCGTGGCAGATCTTATGGTGATCAGAGGACGGCCTTGCTTTAACCCGGTAAGGTCATGGATCGTGTCGAATTTAACACGTTCTGGGTTGAGAGATATAGATTTTGGATGGGGCAAGGCGATATACGCTGGACCAGCGATGGCTGGGGCTGGGTCGTTTCCTGGAGTAAGCTTTTTCGTTGCATGTAAGAATGCTAAAGGGGAAGAAGGCATAACAGCACTACTTTGCTTGCCGCGCAAATCGATGGAGATTTTCGCCAGAGAGATAGATAACATGCTTAGCAGCCACAACGATAATGTTCGAGATTCTAAATTTATCATGTCTTGCCTGTAG 1377 0.4779 MAQPSVSDLMFTVRRRQPELITPAKSTPHEFKLLSDIDDQDGLRCRIPAAFFYPYEQSMQGKDPAQLIRKALAQALVFYYPLAGRLREGPGRKLMVDCNEEGVVFIEADADVTIHQFGDPIQPPFPCFEELLYNVPGLEGIINCPPLVVQVTRLKCGGFVLAYFFNHTMWDGHGIAQFFGALAEIARSASEPSVTPVWCRELLNARDPPRVTCTHHEYTEVPDDTEAKMPEAMVQSSFFFGPDKLKAIRQLFSEYHGQYTVFEAFTAFLWRCRTISLQLEPDQEIRLMCISNVRGKTNPPLLPIGYYGNGFVYPAAVTTANKLTRSPLVYALELVKKAKGEATVEYIRSVADLMVIRGRPCFNPVRSWIVSNLTRSGLRDIDFGWGKAIYAGPAMAGAGSFPGVSFFVACKNAKGEEGITALLCLPRKSMEIFAREIDNMLSSHNDNVRDSKFIMSCL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00005 458 Gene3D - 12 215 IPR023213 -
Pral5093g00005 458 Pfam Transferase family 13 438 - -
Pral5093g00005 458 Gene3D - 216 437 IPR023213 -
Pral5093g00005 458 PANTHER ACYL TRANSFERASE 4 10 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00005 Pral-Chr5093 35266 36792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00005 13 435 Monolignol Biosynthesis Gene Families AT5G48930 29.186 6.18e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00005 K19861 - qsu:112029458 558.525