Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00003 ATGCTTTCGCCGTTGGTTTCTTGGATCTTGGCGTCCTCTCCTTCTTCTTCGTCCTCTTCAGAGGAAGAAGATAACTTTGTGGACGATGAAGATCATTACGAGAACGTCGGCGAGAACGAGCATTTCCTCCGCGAAGCCGAGGAGCTTCCCTCAACATCATGCGCTGGTGATACTAAATCCACTCCCGTTGCCCTCGCCGCTCCCGGCGCCGACGACTCTTACATTCCCAACACGGACACGGGCTCTAGAAAACGACGGCGTATCAGCCATTCTTATCCGCGGAGACAATATCAGAGGCTGTGGACGAAGCAAGACGAGATCGAACTCTTGAGGGGATATCTGGGTTACGTCAAGCAGAACAGATGGGCCACCACATCTCTCCAAAACGACGTAACATTCTTCTACGATCACATCAGGCCTAAGTTGAACAAGGACTTCAACAAGAATCAAGTCGTCCAGAAGCTTCGAGTATTAAAGAGAAAACACCAGACCGTTTTGGATAAAATCAACTCCGGCAGGGAAGTTTCACACAAGAACCCCCAGGAGGAGGCGATTTTTGAGATCTCCCAAAAGATCTGGGGCAAGAATCAAGACGAGGAATCAAGCCCAGAACCGGATACCGATAATATCGAGGTGCATAGCGAAGAAGATGATGGCGATGAATCGGGGCGTTTGAATGGGGAGAACAGAGATGTAAAGAAGCTGATAGAGGAGACGATGAGGTCGTGTTTATCACCATTGAACAATAATAATGCAGCGGAAGGATCAGGATTGAAGTTGGTGCAACAATACGGAAGTGGGGGAGAAGGCGATGAGGAAGAGAGAAAGCAAAAGATTTTGGAACTGGAAGCTTATTTGAAGCAGTTGGAATTGTTGCAGGATCAAATTAAAGCTAGAATAGAGGAGTTGCGAAACGAAGGTGAATGA 927 0.479 MLSPLVSWILASSPSSSSSSEEEDNFVDDEDHYENVGENEHFLREAEELPSTSCAGDTKSTPVALAAPGADDSYIPNTDTGSRKRRRISHSYPRRQYQRLWTKQDEIELLRGYLGYVKQNRWATTSLQNDVTFFYDHIRPKLNKDFNKNQVVQKLRVLKRKHQTVLDKINSGREVSHKNPQEEAIFEISQKIWGKNQDEESSPEPDTDNIEVHSEEDDGDESGRLNGENRDVKKLIEETMRSCLSPLNNNNAAEGSGLKLVQQYGSGGEGDEEERKQKILELEAYLKQLELLQDQIKARIEELRNEGE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00003 308 Coils Coil 275 306 - -
Pral5093g00003 308 PANTHER BNAANNG10740D PROTEIN-RELATED 14 301 IPR007592 GO:0006355
Pral5093g00003 308 MobiDBLite consensus disorder prediction 46 88 - -
Pral5093g00003 308 Pfam Protein of unknown function, DUF573 98 194 IPR007592 GO:0006355
Pral5093g00003 308 MobiDBLite consensus disorder prediction 193 209 - -
Pral5093g00003 308 MobiDBLite consensus disorder prediction 193 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00003 Pral-Chr5093 21805 22731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00003 51 195 GeBP Transcription Factor Family AT3G04930 43.709 4.60e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pral5093g00003 DUF573 3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00003 - - pcin:129306633 495.352