Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5093g00001 ATGGCTGATAAGGCGGTTACTGTGAGAACCCGAAAGTTCATGACCAACCGTCTGTTATCAAGAAAACAATTTGTCATTGATGTACTTCATCCTGGAAGGCCAAACGTATCCAAGGCGGAGCTTAAGGAGAAGCTAGCAAGGATGTATGATGTCAAAGACCCCAATGCAATTTTTGTCTTCAAGTTTAGAACTCACTTTGGAGGCGGGAAATCAACTGGATTTGGTTTAATTTATGATTCTGTTGAAAATGCAAAGAAGTATGAGCCCAAGTATAGGCTTATCAGGAATGGACTCGCTACCAAGGTCGAGAAGTCTAGGAAGCAGCTTAAAGAGCGCAAGAATCGTGCTAAGAAAGTCCGTGGAGTAAAGAAGACTAAGGCATCTGAAGCTGCTAAGAAGAAGTGA 405 0.4247 MADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVRGVKKTKASEAAKKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5093g00001 134 MobiDBLite consensus disorder prediction 110 134 - -
Pral5093g00001 134 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pral5093g00001 134 Coils Coil 99 119 - -
Pral5093g00001 134 FunFam 40S ribosomal protein S24 1 134 - -
Pral5093g00001 134 MobiDBLite consensus disorder prediction 103 134 - -
Pral5093g00001 134 PANTHER 40S RIBOSOMAL PROTEIN S24 1 131 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pral5093g00001 134 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Pral5093g00001 134 Gene3D - 1 133 - -
Pral5093g00001 134 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pral5093g00001 134 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5093g00001 Pral-Chr5093 12046 13758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5093g00001 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.714 1.54e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5093g00001 K02974 - sind:105165299 238.424