Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00067 ATGTTCGATGGAGTGCCAGAGCAGCTCCACCAATTCATAGCCCCAAGAAACTCACTCCCTCTTCACCTCCCCTTCCCTCCTTTCGATGCTTATAACCCTTCTTCGCAGCATCACTTGCCCCTCTCACCACCAAATCTTCTGTCCCCATTGCACCGCAAAGGTGAACAACACGATGAGCAGCAACAAAGCAGCATGAACTCAAACATTCATGAAGGAGAACCACAATTGGGCGATCAAGACCTGGTTCTTTCCACCTGGCCTGACGACGAAGTGCTTGCTCTCTTGAGGATCAGATCTGGCCTCGACGCTTGCTTCCCTGAACTCACCTGGGAACATGTTTCAAGGAAGCTTGCAGAACTTGGATTTAAAAGGAGTGCGGAGAAGTGCAAGGAGAAGTTCGAAGAGGAGGAAGCTAGTTGCTTCAACAACATCCATTACACCAAGAACAACGGTTGCCGCTTTATCAGTGAGCTCGAGCCGCTTTATCAAATCCCTGCGGTCGACGTTGAGCTTGGGTCTCAAGAGAGTAAGCAGCCGCCGCCGCAAAAGCCGACTGAGGAACAACACAGGAGGATTGATCACGCATTAGAAGATGCCTCAGGAAATGACGCCTCATTGACTCAACAATGCGAGGAAACTGTGAAAATGATGGGAACATCAAAGCGCAGGAAGAGAAAGAGGCACGATAAGTTTGAGAATTTGAAGGGTTTTTGTGAGAACATGGTGAACGAAATGATGGCCAAGCAGGAACAGATGCACAATAAGCTGCTGGAGGACATGTTTGAAAGAGACCGAGAGATACTCGCTCGAGATGAAGCTTGGAAGAAACGGGAGGTAGATAGGATGAACTGGGAGCTCGACATAATGGCGAAAGAGCAGGCTGTTGCGGGCCAAAGGCAAGCCGCCATTATTGATTTGCTGAAGAAAATTTCAGACCAGAGCCATCGTGCCAAAACGGTGGACGATCCCAATCCAAATTCTCTGGCGGCTACTTCCCTGTCGAGCTCGCAGAACCCTAGCCCATGTTGTAATTATACTGGGGAGAACAGTCCCGAGCCGCCGCCACCCGTGGTTCTTAATTATACATGCGAAGGGGCATCAGATCAAAACCCTGATAGTGCAGCCAAAGTTCCTAATCCCTCTTCAAATGACTCTGCTCCAGCACTCACCCGGAACCCTAACACCGTCCTTGCCCAGACAAATGAATTGCCCGAAAAAACAGCTTCGACGCATAGAGGCGGGTGGGATAATTGTGGGTGGAGGGAGAAAGAAGAGGTGGGAAGAAGATGGCCGAGAGAGGAAGTGATGGCACTGATAAACCTGAGAAGCAGCGCGAACGAAGAGAGGGAGGGAGGGAGCAGCAGGACGCCTCTGTGGGAGAGGATATCGGAAGGGATGAGGGAAATGGGGTACAGGAGAAGCGCCAAGAGATGCAAAGAGAAGTGGGAGAACATAAACAAATACTTCAGGAAGACGAAGCATCTGAGTAAGAAAAGGTCGGTGGATTCTAGAACCTGTCCCTACTTCCATCAACTCGCTTCTTTGTATTCTCAAGGAAATGCTTCAACGGCTTAA 1575 0.499 MFDGVPEQLHQFIAPRNSLPLHLPFPPFDAYNPSSQHHLPLSPPNLLSPLHRKGEQHDEQQQSSMNSNIHEGEPQLGDQDLVLSTWPDDEVLALLRIRSGLDACFPELTWEHVSRKLAELGFKRSAEKCKEKFEEEEASCFNNIHYTKNNGCRFISELEPLYQIPAVDVELGSQESKQPPPQKPTEEQHRRIDHALEDASGNDASLTQQCEETVKMMGTSKRRKRKRHDKFENLKGFCENMVNEMMAKQEQMHNKLLEDMFERDREILARDEAWKKREVDRMNWELDIMAKEQAVAGQRQAAIIDLLKKISDQSHRAKTVDDPNPNSLAATSLSSSQNPSPCCNYTGENSPEPPPPVVLNYTCEGASDQNPDSAAKVPNPSSNDSAPALTRNPNTVLAQTNELPEKTASTHRGGWDNCGWREKEEVGRRWPREEVMALINLRSSANEEREGGSSRTPLWERISEGMREMGYRRSAKRCKEKWENINKYFRKTKHLSKKRSVDSRTCPYFHQLASLYSQGNASTA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00067 524 MobiDBLite consensus disorder prediction 320 347 - -
Pral5091g00067 524 CDD GT1 428 493 - -
Pral5091g00067 524 MobiDBLite consensus disorder prediction 34 74 - -
Pral5091g00067 524 PANTHER FI21293P1 53 520 - -
Pral5091g00067 524 ProSiteProfiles Myb-like domain profile. 78 137 IPR001005 -
Pral5091g00067 524 FunFam Trihelix transcription factor GT-2 86 142 - -
Pral5091g00067 524 Pfam Myb/SANT-like DNA-binding domain 428 514 IPR044822 -
Pral5091g00067 524 Pfam Myb/SANT-like DNA-binding domain 85 158 IPR044822 -
Pral5091g00067 524 Gene3D - 430 491 - -
Pral5091g00067 524 Gene3D - 86 138 - -
Pral5091g00067 524 ProSiteProfiles Myb-like domain profile. 429 486 IPR001005 -
Pral5091g00067 524 MobiDBLite consensus disorder prediction 363 392 - -
Pral5091g00067 524 FunFam Trihelix transcription factor GT-2 430 491 - -
Pral5091g00067 524 MobiDBLite consensus disorder prediction 315 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00067 Pral-Chr5091 319711 322441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00067 231 518 Trihelix Transcription Factor Family AT5G28300 41.472 5.81e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5091g00067 Myb_DNA-bind_4 9.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00067 - - pcin:129307148 508.064