Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00064 ATGGAGCAGTATGAAATACTGGAGCAAATTGGAAAAGGTGCTTTCGGCTCTGCTCTTCTTGTGCGGCATAAGCATGAGAAAAAAAAATATGTGCTGAAGAAAATTCGCCTTGCTCGCCAAACTGAGCGGTCTCGTAGATCTGCACACCAGGAGATGGAGCTAATCTCTAAATTAAGAAATCCATTTATCGTCGAATATAAAGACTCCTGGGTAGAAAAGGGGTGCTATGTGTGCATTATTATAGGTTATTGTGAGGGCGGAGATATGGCAGAAGCTATAAAAAAGGCTAATGGTGATTTTTTCCCTGAGGAGAAACTTTGCAAGTGGCTCGTTCAACTTCTTATGGCCCTTGACTACTTGCACCTGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTTTTGACAAAAGATCAAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATATTGACTTCAGATGATCTTGCTTCCTCTGTTGTCGGAACTCCTAGTTACATGTGCCCTGAGCTCTTGGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCCCTGGGATGCTGTATATATGAAATGGCAGCTCATAAGCCTGCATTTAAAGCATTTGATATACAGGCACTAATCAACAAGATTAACAGGTCTATAGTGGCTCCACTGCCAACAAAGTATTCTGGTGCATTTCGGAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCTGAGCTTAGACCTAGTGCTGCGGAGCTGCTTGGACACCGGCATCTTCAACCTTACATTCACAGGATCCATTTGAAGCTTAATAGCCCCAGGCGAAGTACACTACCAGTTCACTGGTCAGAATCCAACTACATGAAGAAAACTAGGTTTCTGGAGTCAGAAGATGATCCTGTTTCAATATACAGAGATAAGCGACATTCTTTTAGTAATGATCTGACTCTTAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGCTTGCTCTACCCTAGAAATCGAGTGTACTCCAGATCATTTGAATCAAGGGTTGGCAGAGCTATGTGTTGGAGATAGCCTTGAGCTGAAGGCAGTCTGTAAACCTGTTGTTTCAAGGACATCTTTCACCAAGGCTCCAAGACATACCTCCGTAAAGGCTTCTGCCACCTCTAAGAAACCAGTGGAGCCCACAAAAAAGCGTGTGTCGCTTCCTACTCCACGCAAAGCCAGACAACCAATCCATACAACTCGCAGAGTATCATTTCCATTACATACGAGAAGTTCTGATCAACACTCTCATCATGGGCCTGGTATTGGTTTACTTAGCCATATAAAGTCGCCAGACATTTCAGTAAACTCTCCTAGAATTGATAAGATAGCTGAATTCCCACTAGCATCATACGAGGATCCACTTTTTCCCATCTTTAGAACCCCACCCTCAGCCCAGGGTTCCTCAGGCTCTGCACCTTGTGGTGATCGTTCAATCATGAAAGATAGATGCACGGTTCAGATAAGAGCTTCTGTCAAGCATCGATTGACAGATTCATGGCAGGGAATCAAGCTAAACACATTTCGGGAAAATGCCAAGGATAAAAGTAGCTCCTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCATGCCTCTTCAGACATGCGCCGTGGGCGGTTTGACACTTCATCATACCAACAAAGGGCTGAAGCCTTGGAAGGGTTGCTTGAATTTAGCGCAAGATTGCTACAACATGAAAGGTATGAAGAACTAGGGGTTTTATTGAAACCATTTGGGCCAGGAAAGGTCTCTCCAAGAGAAACTGCTATCTGGTTAAGTAAGAGCTTCAAAGAGAACACTCTCAACCGTGAAGAGTCCCTGTAA 1854 0.4342 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGDFFPEEKLCKWLVQLLMALDYLHLNHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQALINKINRSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAAELLGHRHLQPYIHRIHLKLNSPRRSTLPVHWSESNYMKKTRFLESEDDPVSIYRDKRHSFSNDLTLNPSISGAEQDSACSTLEIECTPDHLNQGLAELCVGDSLELKAVCKPVVSRTSFTKAPRHTSVKASATSKKPVEPTKKRVSLPTPRKARQPIHTTRRVSFPLHTRSSDQHSHHGPGIGLLSHIKSPDISVNSPRIDKIAEFPLASYEDPLFPIFRTPPSAQGSSGSAPCGDRSIMKDRCTVQIRASVKHRLTDSWQGIKLNTFRENAKDKSSSSDQNATAGASSHASSDMRRGRFDTSSYQQRAEALEGLLEFSARLLQHERYEELGVLLKPFGPGKVSPRETAIWLSKSFKENTLNREESL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00064 617 SUPERFAMILY Protein kinase-like (PK-like) 1 304 IPR011009 -
Pral5091g00064 617 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Pral5091g00064 617 MobiDBLite consensus disorder prediction 520 554 - -
Pral5091g00064 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pral5091g00064 617 ProSiteProfiles Protein kinase domain profile. 4 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00064 617 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pral5091g00064 617 MobiDBLite consensus disorder prediction 527 541 - -
Pral5091g00064 617 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 567 - -
Pral5091g00064 617 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00064 617 MobiDBLite consensus disorder prediction 370 384 - -
Pral5091g00064 617 MobiDBLite consensus disorder prediction 370 430 - -
Pral5091g00064 617 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Pral5091g00064 617 Gene3D Transferase(Phosphotransferase) domain 1 84 273 - -
Pral5091g00064 617 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral5091g00064 617 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00064 617 CDD STKc_Nek 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00064 Pral-Chr5091 307491 314002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00064 3 512 MAP Kinase Kinase Kinase AT3G13530 25.465 1.14e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pral5091g00064 Pkinase 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00064 K08857 - gmx:100804898 957.207