Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00063 ATGGAGGTAAATTTTATTATTAATCACATGGAGCAGTATGAAATACTGGAGCAAATTGGAAAAGGTGCTTTCGGCTCTGCTCTTCTTGTGCGGCATAAGCATGAGAAAAAAAAATATGTGCTGAAGAAAATTCGCCTTGCTCGCCAAACTGAGCGGTCTCGTAGATCTGCACACCAGGAGATGGAGCTAATCTCTAAATTAAGAAATCCATTTATCGTCGAATATAAAGACTCCTGGGTAGAAAAGGGGTGCTATGTGTGCATTATTATAGGTTATTGTGAGGGCGGAGATATGGCAGAAGCTATAAAAAAGGCTAATGGTGATTTTTTCCCTGAGGAGAAACTTTGCAAGTGGCTCGTTCAACTTCTTATGGCCCTTGACTACTTGCACCTGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTTTTGACAAAAGATCAAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATATTGACTTCAGATGATCTTGCTTCCTCTGTTGTCGGAACTCCTAGTTACATGTGCCCTGAGCTCTTGGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCCCTGGGATGCTGTATATATGAAATGGCAGCTCATAAGCCTGCATTTAAAGCATTTGATATACAGGCACTAATCAACAAGATTAACAGGTCTATAGTGGCTCCACTGCCAACAAAGTATTCTGGTGCATTTCGGAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCTGAGCTTAGACCTAGTGCTGCGGAGCTGCTTGGACACCGGCATCTTCAACCTTACATTCACAGGATCCATTTGAAGCTTAATAGCCCCAGGCGAAGTACACTACCAGTTCACTGGTCAGAATCCAACTACATGAAGAAAACTAGGTTTCTGGAGTCAGAAGATGATCCTGTTTCAATATACAGAGATAAGCGACATTCTTTTAGTAATGATCTGACTCTTAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGCTTGCTCTACCCTAGAAATCGAGTGTACTCCAGATCATTTGAATCAAGGGTTGGCAGAGCTATGTGTTGGAGATAGCCTTGAGCTGAAGGCAGTCTGTAAACCTGTTGTTTCAAGGACATCTTTCACCAAGGCTCCAAGACATACCTCCGTAAAGGCTTCTGCCACCTCTAAGAAACCAGTGGAGCCCACAAAAAAGCGTGTGTCGCTTCCTACTCCACGCAAAGCCAGACAACCAATCCATACAACTCGCAGAGTATCATTTCCATTACATACGAGAAGTTCTGATCAACACTCTCATCATGGGCCTGGTATTGGTTTACTTAGCCATATAAAGTCGCCAGACATTTCAGTAAACTCTCCTAGAATTGATAAGATAGCTGAATTCCCACTAGCATCATACGAGGATCCACTTTTTCCCATCTTTAGAACCCCACCCTCAGCCCAGGGTTCCTCAGGCTCTGCACCTTGTGGTGATCGTTCAATCATGAAAGATAGATGCACGGTTCAGATAAGAGCTTCTGTCAAGCATCGATTGACAGATTCATGGCAGGGAATCAAGCTAAACACATTTCGGGAAAATGCCAAGGATAAAAGTAGCTCCTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCATGCCTCTTCAGACATGCGCCGTGGGCGGTTTGACACTTCATCATACCAACAAAGGGCTGAAGCCTTGGAAGGGTTGCTTGAATTTAGCGCAAGATTGCTACAACATGAAAGGTATGAAGAACTAGGGGTTTTATTGAAACCATTTGGGCCAGGAAAGGTCTCTCCAAGAGAAACTGCTATCTGGTTAAGTAAGAGCTTCAAAGAGAACACTCTCAACCGTGAAGAGTCCCTGTAA 1881 0.4312 MEVNFIINHMEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGDFFPEEKLCKWLVQLLMALDYLHLNHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQALINKINRSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAAELLGHRHLQPYIHRIHLKLNSPRRSTLPVHWSESNYMKKTRFLESEDDPVSIYRDKRHSFSNDLTLNPSISGAEQDSACSTLEIECTPDHLNQGLAELCVGDSLELKAVCKPVVSRTSFTKAPRHTSVKASATSKKPVEPTKKRVSLPTPRKARQPIHTTRRVSFPLHTRSSDQHSHHGPGIGLLSHIKSPDISVNSPRIDKIAEFPLASYEDPLFPIFRTPPSAQGSSGSAPCGDRSIMKDRCTVQIRASVKHRLTDSWQGIKLNTFRENAKDKSSSSDQNATAGASSHASSDMRRGRFDTSSYQQRAEALEGLLEFSARLLQHERYEELGVLLKPFGPGKVSPRETAIWLSKSFKENTLNREESL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00063 626 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 10 576 - -
Pral5091g00063 626 MobiDBLite consensus disorder prediction 379 393 - -
Pral5091g00063 626 MobiDBLite consensus disorder prediction 536 550 - -
Pral5091g00063 626 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pral5091g00063 626 CDD STKc_Nek 12 262 - -
Pral5091g00063 626 FunFam Serine/threonine-protein kinase Nek3 95 341 - -
Pral5091g00063 626 Gene3D Transferase(Phosphotransferase) domain 1 93 282 - -
Pral5091g00063 626 MobiDBLite consensus disorder prediction 379 439 - -
Pral5091g00063 626 FunFam Serine/threonine-protein kinase Nek2 10 92 - -
Pral5091g00063 626 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00063 626 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Pral5091g00063 626 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00063 626 SUPERFAMILY Protein kinase-like (PK-like) 10 313 IPR011009 -
Pral5091g00063 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pral5091g00063 626 MobiDBLite consensus disorder prediction 529 563 - -
Pral5091g00063 626 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00063 Pral-Chr5091 307491 314002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00063 12 521 MAP Kinase Kinase Kinase AT3G13530 25.465 9.01e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pral5091g00063 Pkinase 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00063 K08857 - gmx:100804898 957.207