Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00050 ATGGATAGGGTGTTTTCAGTGGATGAAATCTCCGACCAGTTCTGGTCACCGCCGACGTCCACCGGAACCCATGAACCCTCCCAGATGAACCGCAGCGCCTCCGAGTGGGCCTTCCAGCGCTTCCTTCAGGAAGCTTCCGTGTCCTCCCCGACCTCTACGGCTTCTTCCTCCCTCCCTCCTCACCCTAACGACGACCGTCCGCTTCACATCAAGGATCAACCCAAACAGGATCCCGCTCTGAATACGGGGGTCTCGCGGCTCCAGAACGATGGTCCCGTCCAGGCCAATGTGCCTTCTACCCCTCCGTCTATTCCCAACATTCCCGTTAATTCCGATGACTACCAGGCTTACCTCAAGAACAAACTCAATCTCGCCTGTGCCGCGGTCGCATTGTCTCGGGGATCTTTAATCAAAGCTCAAGATTCAGCTACTTTTGTTGACAGCGGATCACAGGCTTCTGATTCTTGTCAAGTTGGAGCTCGGGCTACTTTTAAAGGATCTGGCATATCTGGTTCGTCTGGAAGTGATCCATCTAAATTACTGGATAAAGATACCAAAGCACCAGTTGGAATTCCTTCCTTACCCGTGATTCAAAAGAAGCCAGCTGTTGCAAACAAGCCAACAACAAGCGGATCATCAAGGGACCTGTCAGATGACGATGACATTGACGGAGAAATGGAGATGACTGAAAATATGGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAATCTGCTAGACGTTCAAGAAGGAGAAAGCAGGCTCATTTAACTGAGCTTGAGACACAGGTTTCTCAATTAAGAGTTGAAAATTCATCCTTGTTAAAGCGTCTCACTGATGTAAGCCATAAGTTCAATGAGTCTGGTGTTGACAACAGAGTGTTAAAAGCTGACATTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGATTGAACCCAATGTTTCATGCCATGTCCGAGATATCATCAATGGGAATCTCTTCATTTGATGGAAGCCCTCCAGACACGTCAGCAGATGCTGCTGTTCCCATGCAAGATGATCCGATCCATCACTTTTATCAACCTACAGATAATCCTTTGTCCGGTCATGATCTGAGGGCAAACAATGGATTAGGGGATGTTTGTTCAAATGAAAATGTTCAGCAGAGCGGAGCAGCTGTGGTAACTGGGAACAAGATGGGACAAACAACTTCACTTCAGAGGGTGGCCAGCTTAGAACATCTGCAGAAGAGAATTTGTGGTGGTGCGGATTCATCTGGACATTCTTCCAGCGGAGATCATTAG 1320 0.4765 MDRVFSVDEISDQFWSPPTSTGTHEPSQMNRSASEWAFQRFLQEASVSSPTSTASSSLPPHPNDDRPLHIKDQPKQDPALNTGVSRLQNDGPVQANVPSTPPSIPNIPVNSDDYQAYLKNKLNLACAAVALSRGSLIKAQDSATFVDSGSQASDSCQVGARATFKGSGISGSSGSDPSKLLDKDTKAPVGIPSLPVIQKKPAVANKPTTSGSSRDLSDDDDIDGEMEMTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDVSHKFNESGVDNRVLKADIETLRAKVKMAEETVKRITGLNPMFHAMSEISSMGISSFDGSPPDTSADAAVPMQDDPIHHFYQPTDNPLSGHDLRANNGLGDVCSNENVQQSGAAVVTGNKMGQTTSLQRVASLEHLQKRICGGADSSGHSSSGDH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00050 439 CDD bZIP_plant_GBF1 239 290 IPR045314 GO:0003700|GO:0006355
Pral5091g00050 439 Gene3D - 237 290 - -
Pral5091g00050 439 MobiDBLite consensus disorder prediction 163 227 - -
Pral5091g00050 439 MobiDBLite consensus disorder prediction 78 97 - -
Pral5091g00050 439 MobiDBLite consensus disorder prediction 163 178 - -
Pral5091g00050 439 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Pral5091g00050 439 FunFam BZIP transcription factor 236 287 - -
Pral5091g00050 439 Coils Coil 247 281 - -
Pral5091g00050 439 PANTHER BASIC LEUCINE ZIPPER 63 1 428 - -
Pral5091g00050 439 MobiDBLite consensus disorder prediction 1 107 - -
Pral5091g00050 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Pral5091g00050 439 Pfam bZIP transcription factor 237 285 IPR004827 GO:0003700|GO:0006355
Pral5091g00050 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 291 IPR004827 GO:0003700|GO:0006355
Pral5091g00050 439 MobiDBLite consensus disorder prediction 12 60 - -
Pral5091g00050 439 Pfam Basic leucine-zipper C terminal 305 428 IPR020983 -
Pral5091g00050 439 SUPERFAMILY Leucine zipper domain 237 286 IPR046347 GO:0003700|GO:0006355
Pral5091g00050 439 Coils Coil 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00050 Pral-Chr5091 271277 275120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00050 1 327 bZIP Transcription Factor Family AT4G02640 41.003 6.29e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5091g00050 bZIP_C 4.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00050 K25784 - qsa:O6P43_007630 494.582